Gene : Eucgr.H03985 E. grandis v2.0
Defline:  (1 of 4) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Genomic Order:  2985
Name:  ? Eucgr.H03985 Secondary Identifier:  ? PAC:32041667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03985 0.5kb upstream 0.5kb upstream 734 true Chr08: 54495225-54495958 Eucalyptus grandis
Eucgr.H03985 0.5kb upstream 0.5kb upstream 500 false Chr08: 54495459-54495958 Eucalyptus grandis
Eucgr.H03985 0.5kb downstream 0.5kb downstream 734 true Chr08: 54494725-54495458 Eucalyptus grandis
Eucgr.H03985 0.5kb downstream 0.5kb downstream 500 false Chr08: 54494725-54495224 Eucalyptus grandis
Eucgr.H03985 1.0kb upstream 1.0kb upstream 1234 true Chr08: 54495225-54496458 Eucalyptus grandis
Eucgr.H03985 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54495459-54496458 Eucalyptus grandis
Eucgr.H03985 1.0kb downstream 1.0kb downstream 1234 true Chr08: 54494225-54495458 Eucalyptus grandis
Eucgr.H03985 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54494225-54495224 Eucalyptus grandis
Eucgr.H03985 2.0kb upstream 2.0kb upstream 2234 true Chr08: 54495225-54497458 Eucalyptus grandis
Eucgr.H03985 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54495459-54497458 Eucalyptus grandis
Eucgr.H03985 2.0kb downstream 2.0kb downstream 2234 true Chr08: 54493225-54495458 Eucalyptus grandis
Eucgr.H03985 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54493225-54495224 Eucalyptus grandis
Eucgr.H03985 5.0kb upstream 5.0kb upstream 5234 true Chr08: 54495225-54500458 Eucalyptus grandis
Eucgr.H03985 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54495459-54500458 Eucalyptus grandis
Eucgr.H03985 5.0kb downstream 5.0kb downstream 5234 true Chr08: 54490225-54495458 Eucalyptus grandis
Eucgr.H03985 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54490225-54495224 Eucalyptus grandis
Eucgr.H03985 10.0kb upstream 10.0kb upstream 10234 true Chr08: 54495225-54505458 Eucalyptus grandis
Eucgr.H03985 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54495459-54505458 Eucalyptus grandis
Eucgr.H03985 10.0kb downstream 10.0kb downstream 10234 true Chr08: 54485225-54495458 Eucalyptus grandis
Eucgr.H03985 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54485225-54495224 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.32121 0.0 23.204   High
cufflinks 0.905403 0.0 5.67257    
cufflinks 0.246915 0.0 3.46446 Low  
cufflinks 0.313698 0.0 3.87505 Low  
cufflinks 8.51893 0.0 29.6806   High
cufflinks 0.018985 0.0 1.02647 Low Low

0 Strain