Gene : Eucgr.H03939 E. grandis v2.0
Defline:  (1 of 2) PTHR10064//PTHR10064:SF3 - 60S RIBOSOMAL PROTEIN L22 Genomic Order:  2942
Name:  ? Eucgr.H03939 Secondary Identifier:  ? PAC:32044199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03939 0.5kb upstream 0.5kb upstream 3241 true Chr08: 53907569-53910809 Eucalyptus grandis
Eucgr.H03939 0.5kb upstream 0.5kb upstream 500 false Chr08: 53907569-53908068 Eucalyptus grandis
Eucgr.H03939 0.5kb downstream 0.5kb downstream 3241 true Chr08: 53908069-53911309 Eucalyptus grandis
Eucgr.H03939 0.5kb downstream 0.5kb downstream 500 false Chr08: 53910810-53911309 Eucalyptus grandis
Eucgr.H03939 1.0kb upstream 1.0kb upstream 3741 true Chr08: 53907069-53910809 Eucalyptus grandis
Eucgr.H03939 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53907069-53908068 Eucalyptus grandis
Eucgr.H03939 1.0kb downstream 1.0kb downstream 3741 true Chr08: 53908069-53911809 Eucalyptus grandis
Eucgr.H03939 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53910810-53911809 Eucalyptus grandis
Eucgr.H03939 2.0kb upstream 2.0kb upstream 4741 true Chr08: 53906069-53910809 Eucalyptus grandis
Eucgr.H03939 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53906069-53908068 Eucalyptus grandis
Eucgr.H03939 2.0kb downstream 2.0kb downstream 4741 true Chr08: 53908069-53912809 Eucalyptus grandis
Eucgr.H03939 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53910810-53912809 Eucalyptus grandis
Eucgr.H03939 5.0kb upstream 5.0kb upstream 7741 true Chr08: 53903069-53910809 Eucalyptus grandis
Eucgr.H03939 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53903069-53908068 Eucalyptus grandis
Eucgr.H03939 5.0kb downstream 5.0kb downstream 7741 true Chr08: 53908069-53915809 Eucalyptus grandis
Eucgr.H03939 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53910810-53915809 Eucalyptus grandis
Eucgr.H03939 10.0kb upstream 10.0kb upstream 12741 true Chr08: 53898069-53910809 Eucalyptus grandis
Eucgr.H03939 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53898069-53908068 Eucalyptus grandis
Eucgr.H03939 10.0kb downstream 10.0kb downstream 12741 true Chr08: 53908069-53920809 Eucalyptus grandis
Eucgr.H03939 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53910810-53920809 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073965 5270 Rosid View MSA
123748426 5271 Pentapetalae View MSA
122787714 5272 Eudicot View MSA
122045649 5273 Angiosperm View MSA
121348582 5274 Embryophyte View MSA
123423882 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.191 0.0 136.824 High  
cufflinks 50.1807 0.0 114.432 High  
cufflinks 38.2292 0.0 96.8395 High Low
cufflinks 64.5496 0.0 162.132 High  
cufflinks 113.642 0.0 303.559 High High
cufflinks 49.0035 0.0 121.271 High  

0 Strain