Gene : Eucgr.H03953 E. grandis v2.0
Defline:  (1 of 1) 2.3.1.168 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase / Dihydrolipoyl transacylase Genomic Order:  2955
Name:  ? Eucgr.H03953 Secondary Identifier:  ? PAC:32044717
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5046 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03953 0.5kb upstream 0.5kb upstream 4610 true Chr08: 54046717-54051326 Eucalyptus grandis
Eucgr.H03953 0.5kb upstream 0.5kb upstream 500 false Chr08: 54046717-54047216 Eucalyptus grandis
Eucgr.H03953 0.5kb downstream 0.5kb downstream 4610 true Chr08: 54047217-54051826 Eucalyptus grandis
Eucgr.H03953 0.5kb downstream 0.5kb downstream 500 false Chr08: 54051327-54051826 Eucalyptus grandis
Eucgr.H03953 1.0kb upstream 1.0kb upstream 5110 true Chr08: 54046217-54051326 Eucalyptus grandis
Eucgr.H03953 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54046217-54047216 Eucalyptus grandis
Eucgr.H03953 1.0kb downstream 1.0kb downstream 5110 true Chr08: 54047217-54052326 Eucalyptus grandis
Eucgr.H03953 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54051327-54052326 Eucalyptus grandis
Eucgr.H03953 2.0kb upstream 2.0kb upstream 6110 true Chr08: 54045217-54051326 Eucalyptus grandis
Eucgr.H03953 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54045217-54047216 Eucalyptus grandis
Eucgr.H03953 2.0kb downstream 2.0kb downstream 6110 true Chr08: 54047217-54053326 Eucalyptus grandis
Eucgr.H03953 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54051327-54053326 Eucalyptus grandis
Eucgr.H03953 5.0kb upstream 5.0kb upstream 9110 true Chr08: 54042217-54051326 Eucalyptus grandis
Eucgr.H03953 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54042217-54047216 Eucalyptus grandis
Eucgr.H03953 5.0kb downstream 5.0kb downstream 9110 true Chr08: 54047217-54056326 Eucalyptus grandis
Eucgr.H03953 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54051327-54056326 Eucalyptus grandis
Eucgr.H03953 10.0kb upstream 10.0kb upstream 14110 true Chr08: 54037217-54051326 Eucalyptus grandis
Eucgr.H03953 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54037217-54047216 Eucalyptus grandis
Eucgr.H03953 10.0kb downstream 10.0kb downstream 14110 true Chr08: 54047217-54061326 Eucalyptus grandis
Eucgr.H03953 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54051327-54061326 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066598 5270 Rosid View MSA
123740917 5271 Pentapetalae View MSA
122788338 5272 Eudicot View MSA
122046167 5273 Angiosperm View MSA
121344663 5274 Embryophyte View MSA
123425518 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.37119 0.0 21.5157    
cufflinks 5.97639 0.0 14.2402    
cufflinks 9.29661 0.0 21.3453    
cufflinks 2.6863 0.0 6.9273   Low
cufflinks 2.20286 0.0 5.80516   Low
cufflinks 13.4922 0.0 30.3392   High

0 Strain