Gene : Eucgr.H03892 E. grandis v2.0
Defline:  (1 of 6) PTHR11064:SF42 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 Genomic Order:  2901
Name:  ? Eucgr.H03892 Secondary Identifier:  ? PAC:32042947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03892 0.5kb upstream 0.5kb upstream 1478 true Chr08: 53309417-53310894 Eucalyptus grandis
Eucgr.H03892 0.5kb upstream 0.5kb upstream 500 false Chr08: 53310395-53310894 Eucalyptus grandis
Eucgr.H03892 0.5kb downstream 0.5kb downstream 1478 true Chr08: 53308917-53310394 Eucalyptus grandis
Eucgr.H03892 0.5kb downstream 0.5kb downstream 500 false Chr08: 53308917-53309416 Eucalyptus grandis
Eucgr.H03892 1.0kb upstream 1.0kb upstream 1978 true Chr08: 53309417-53311394 Eucalyptus grandis
Eucgr.H03892 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53310395-53311394 Eucalyptus grandis
Eucgr.H03892 1.0kb downstream 1.0kb downstream 1978 true Chr08: 53308417-53310394 Eucalyptus grandis
Eucgr.H03892 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53308417-53309416 Eucalyptus grandis
Eucgr.H03892 2.0kb upstream 2.0kb upstream 2978 true Chr08: 53309417-53312394 Eucalyptus grandis
Eucgr.H03892 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53310395-53312394 Eucalyptus grandis
Eucgr.H03892 2.0kb downstream 2.0kb downstream 2978 true Chr08: 53307417-53310394 Eucalyptus grandis
Eucgr.H03892 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53307417-53309416 Eucalyptus grandis
Eucgr.H03892 5.0kb upstream 5.0kb upstream 5978 true Chr08: 53309417-53315394 Eucalyptus grandis
Eucgr.H03892 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53310395-53315394 Eucalyptus grandis
Eucgr.H03892 5.0kb downstream 5.0kb downstream 5978 true Chr08: 53304417-53310394 Eucalyptus grandis
Eucgr.H03892 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53304417-53309416 Eucalyptus grandis
Eucgr.H03892 10.0kb upstream 10.0kb upstream 10978 true Chr08: 53309417-53320394 Eucalyptus grandis
Eucgr.H03892 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53310395-53320394 Eucalyptus grandis
Eucgr.H03892 10.0kb downstream 10.0kb downstream 10978 true Chr08: 53299417-53310394 Eucalyptus grandis
Eucgr.H03892 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53299417-53309416 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
124070521 5270 Rosid View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.498031 0.0 1.71011    
cufflinks 0.561574 0.0 1.90113 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain