Gene : Eucgr.H03883 E. grandis v2.0
Defline:  (1 of 3) PTHR23336:SF14 - CW-TYPE ZINC-FINGER PROTEIN Genomic Order:  2893
Name:  ? Eucgr.H03883 Secondary Identifier:  ? PAC:32042704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03883 0.5kb upstream 0.5kb upstream 6991 true Chr08: 53208169-53215159 Eucalyptus grandis
Eucgr.H03883 0.5kb upstream 0.5kb upstream 500 false Chr08: 53208169-53208668 Eucalyptus grandis
Eucgr.H03883 0.5kb downstream 0.5kb downstream 6991 true Chr08: 53208669-53215659 Eucalyptus grandis
Eucgr.H03883 0.5kb downstream 0.5kb downstream 500 false Chr08: 53215160-53215659 Eucalyptus grandis
Eucgr.H03883 1.0kb upstream 1.0kb upstream 7491 true Chr08: 53207669-53215159 Eucalyptus grandis
Eucgr.H03883 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53207669-53208668 Eucalyptus grandis
Eucgr.H03883 1.0kb downstream 1.0kb downstream 7491 true Chr08: 53208669-53216159 Eucalyptus grandis
Eucgr.H03883 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53215160-53216159 Eucalyptus grandis
Eucgr.H03883 2.0kb upstream 2.0kb upstream 8491 true Chr08: 53206669-53215159 Eucalyptus grandis
Eucgr.H03883 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53206669-53208668 Eucalyptus grandis
Eucgr.H03883 2.0kb downstream 2.0kb downstream 8491 true Chr08: 53208669-53217159 Eucalyptus grandis
Eucgr.H03883 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53215160-53217159 Eucalyptus grandis
Eucgr.H03883 5.0kb upstream 5.0kb upstream 11491 true Chr08: 53203669-53215159 Eucalyptus grandis
Eucgr.H03883 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53203669-53208668 Eucalyptus grandis
Eucgr.H03883 5.0kb downstream 5.0kb downstream 11491 true Chr08: 53208669-53220159 Eucalyptus grandis
Eucgr.H03883 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53215160-53220159 Eucalyptus grandis
Eucgr.H03883 10.0kb upstream 10.0kb upstream 16491 true Chr08: 53198669-53215159 Eucalyptus grandis
Eucgr.H03883 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53198669-53208668 Eucalyptus grandis
Eucgr.H03883 10.0kb downstream 10.0kb downstream 16491 true Chr08: 53208669-53225159 Eucalyptus grandis
Eucgr.H03883 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53215160-53225159 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052483 5270 Rosid View MSA
123620586 5271 Pentapetalae View MSA
122654982 5272 Eudicot View MSA
122044427 5273 Angiosperm View MSA
121345237 5274 Embryophyte View MSA
123380178 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.69015 0.0 17.0087    
cufflinks 7.22117 0.0 15.9856    
cufflinks 7.49367 0.0 16.5768    
cufflinks 4.59025 0.0 10.2431    
cufflinks 3.62056 0.0 8.18612   Low
cufflinks 7.22219 0.0 15.9972    

0 Strain