Gene : Eucgr.H03904 E. grandis v2.0
Defline:  (1 of 3) PTHR21136:SF72 - VESICLE-ASSOCIATED MEMBRANE PROTEIN 724 Genomic Order:  2911
Name:  ? Eucgr.H03904 Secondary Identifier:  ? PAC:32043158
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03904 0.5kb upstream 0.5kb upstream 2745 true Chr08: 53443946-53446690 Eucalyptus grandis
Eucgr.H03904 0.5kb upstream 0.5kb upstream 500 false Chr08: 53446191-53446690 Eucalyptus grandis
Eucgr.H03904 0.5kb downstream 0.5kb downstream 2745 true Chr08: 53443446-53446190 Eucalyptus grandis
Eucgr.H03904 0.5kb downstream 0.5kb downstream 500 false Chr08: 53443446-53443945 Eucalyptus grandis
Eucgr.H03904 1.0kb upstream 1.0kb upstream 3245 true Chr08: 53443946-53447190 Eucalyptus grandis
Eucgr.H03904 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53446191-53447190 Eucalyptus grandis
Eucgr.H03904 1.0kb downstream 1.0kb downstream 3245 true Chr08: 53442946-53446190 Eucalyptus grandis
Eucgr.H03904 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53442946-53443945 Eucalyptus grandis
Eucgr.H03904 2.0kb upstream 2.0kb upstream 4245 true Chr08: 53443946-53448190 Eucalyptus grandis
Eucgr.H03904 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53446191-53448190 Eucalyptus grandis
Eucgr.H03904 2.0kb downstream 2.0kb downstream 4245 true Chr08: 53441946-53446190 Eucalyptus grandis
Eucgr.H03904 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53441946-53443945 Eucalyptus grandis
Eucgr.H03904 5.0kb upstream 5.0kb upstream 7245 true Chr08: 53443946-53451190 Eucalyptus grandis
Eucgr.H03904 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53446191-53451190 Eucalyptus grandis
Eucgr.H03904 5.0kb downstream 5.0kb downstream 7245 true Chr08: 53438946-53446190 Eucalyptus grandis
Eucgr.H03904 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53438946-53443945 Eucalyptus grandis
Eucgr.H03904 10.0kb upstream 10.0kb upstream 12245 true Chr08: 53443946-53456190 Eucalyptus grandis
Eucgr.H03904 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53446191-53456190 Eucalyptus grandis
Eucgr.H03904 10.0kb downstream 10.0kb downstream 12245 true Chr08: 53433946-53446190 Eucalyptus grandis
Eucgr.H03904 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53433946-53443945 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052163 5270 Rosid View MSA
123746359 5271 Pentapetalae View MSA
122791516 5272 Eudicot View MSA
122043607 5273 Angiosperm View MSA
121310156 5274 Embryophyte View MSA
123347724 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.202341 0.0 0.756608 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.985296 0.0 2.99069   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.420339 0.0 1.423 Low  
cufflinks 0.638103 0.0 2.05218 Low  

0 Strain