Gene : Eucgr.H03911 E. grandis v2.0
Defline:  (1 of 3) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  2918
Name:  ? Eucgr.H03911 Secondary Identifier:  ? PAC:32045031
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03911 0.5kb upstream 0.5kb upstream 6518 true Chr08: 53495858-53502375 Eucalyptus grandis
Eucgr.H03911 0.5kb upstream 0.5kb upstream 500 false Chr08: 53501876-53502375 Eucalyptus grandis
Eucgr.H03911 0.5kb downstream 0.5kb downstream 6518 true Chr08: 53495358-53501875 Eucalyptus grandis
Eucgr.H03911 0.5kb downstream 0.5kb downstream 500 false Chr08: 53495358-53495857 Eucalyptus grandis
Eucgr.H03911 1.0kb upstream 1.0kb upstream 7018 true Chr08: 53495858-53502875 Eucalyptus grandis
Eucgr.H03911 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53501876-53502875 Eucalyptus grandis
Eucgr.H03911 1.0kb downstream 1.0kb downstream 7018 true Chr08: 53494858-53501875 Eucalyptus grandis
Eucgr.H03911 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53494858-53495857 Eucalyptus grandis
Eucgr.H03911 2.0kb upstream 2.0kb upstream 8018 true Chr08: 53495858-53503875 Eucalyptus grandis
Eucgr.H03911 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53501876-53503875 Eucalyptus grandis
Eucgr.H03911 2.0kb downstream 2.0kb downstream 8018 true Chr08: 53493858-53501875 Eucalyptus grandis
Eucgr.H03911 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53493858-53495857 Eucalyptus grandis
Eucgr.H03911 5.0kb upstream 5.0kb upstream 11018 true Chr08: 53495858-53506875 Eucalyptus grandis
Eucgr.H03911 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53501876-53506875 Eucalyptus grandis
Eucgr.H03911 5.0kb downstream 5.0kb downstream 11018 true Chr08: 53490858-53501875 Eucalyptus grandis
Eucgr.H03911 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53490858-53495857 Eucalyptus grandis
Eucgr.H03911 10.0kb upstream 10.0kb upstream 16018 true Chr08: 53495858-53511875 Eucalyptus grandis
Eucgr.H03911 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53501876-53511875 Eucalyptus grandis
Eucgr.H03911 10.0kb downstream 10.0kb downstream 16018 true Chr08: 53485858-53501875 Eucalyptus grandis
Eucgr.H03911 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53485858-53495857 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073581 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.35771 0.0 5.97911    
cufflinks 0.642691 0.0 1.84069 Low Low
cufflinks 1.71899 0.0 4.47715    
cufflinks 0.925338 0.0 2.54768    
cufflinks 2.29585 0.0 5.80753    
cufflinks 7.45063 0.0 17.0702   High

0 Strain