Gene : Eucgr.H03739 E. grandis v2.0
Defline:  (1 of 6) PTHR20863:SF29 - ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  2793
Name:  ? Eucgr.H03739 Secondary Identifier:  ? PAC:32041505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03739 0.5kb upstream 0.5kb upstream 2057 true Chr08: 51210195-51212251 Eucalyptus grandis
Eucgr.H03739 0.5kb upstream 0.5kb upstream 500 false Chr08: 51211752-51212251 Eucalyptus grandis
Eucgr.H03739 0.5kb downstream 0.5kb downstream 2057 true Chr08: 51209695-51211751 Eucalyptus grandis
Eucgr.H03739 0.5kb downstream 0.5kb downstream 500 false Chr08: 51209695-51210194 Eucalyptus grandis
Eucgr.H03739 1.0kb upstream 1.0kb upstream 2557 true Chr08: 51210195-51212751 Eucalyptus grandis
Eucgr.H03739 1.0kb upstream 1.0kb upstream 1000 false Chr08: 51211752-51212751 Eucalyptus grandis
Eucgr.H03739 1.0kb downstream 1.0kb downstream 2557 true Chr08: 51209195-51211751 Eucalyptus grandis
Eucgr.H03739 1.0kb downstream 1.0kb downstream 1000 false Chr08: 51209195-51210194 Eucalyptus grandis
Eucgr.H03739 2.0kb upstream 2.0kb upstream 3557 true Chr08: 51210195-51213751 Eucalyptus grandis
Eucgr.H03739 2.0kb upstream 2.0kb upstream 2000 false Chr08: 51211752-51213751 Eucalyptus grandis
Eucgr.H03739 2.0kb downstream 2.0kb downstream 3557 true Chr08: 51208195-51211751 Eucalyptus grandis
Eucgr.H03739 2.0kb downstream 2.0kb downstream 2000 false Chr08: 51208195-51210194 Eucalyptus grandis
Eucgr.H03739 5.0kb upstream 5.0kb upstream 6557 true Chr08: 51210195-51216751 Eucalyptus grandis
Eucgr.H03739 5.0kb upstream 5.0kb upstream 5000 false Chr08: 51211752-51216751 Eucalyptus grandis
Eucgr.H03739 5.0kb downstream 5.0kb downstream 6557 true Chr08: 51205195-51211751 Eucalyptus grandis
Eucgr.H03739 5.0kb downstream 5.0kb downstream 5000 false Chr08: 51205195-51210194 Eucalyptus grandis
Eucgr.H03739 10.0kb upstream 10.0kb upstream 11557 true Chr08: 51210195-51221751 Eucalyptus grandis
Eucgr.H03739 10.0kb upstream 10.0kb upstream 10000 false Chr08: 51211752-51221751 Eucalyptus grandis
Eucgr.H03739 10.0kb downstream 10.0kb downstream 11557 true Chr08: 51200195-51211751 Eucalyptus grandis
Eucgr.H03739 10.0kb downstream 10.0kb downstream 10000 false Chr08: 51200195-51210194 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069665 5270 Rosid View MSA
123741889 5271 Pentapetalae View MSA
122795656 5272 Eudicot View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.7662 0.0 9.4221   High
cufflinks 0.0778929 0.0 0.834979 Low  
cufflinks 0.00180305 0.0 0.130772 Low Low
cufflinks 0.0811385 0.0 0.92918 Low  
cufflinks 0.0113545 0.0 0.313755 Low  
cufflinks 0.0098942 0.0 0.328753 Low  

0 Strain