Gene : Eucgr.H03664 E. grandis v2.0
Defline:  (1 of 3) 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Genomic Order:  2742
Name:  ? Eucgr.H03664 Secondary Identifier:  ? PAC:32044018
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7560 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03664 0.5kb upstream 0.5kb upstream 4699 true Chr08: 50370167-50374865 Eucalyptus grandis
Eucgr.H03664 0.5kb upstream 0.5kb upstream 500 false Chr08: 50370167-50370666 Eucalyptus grandis
Eucgr.H03664 0.5kb downstream 0.5kb downstream 4699 true Chr08: 50370667-50375365 Eucalyptus grandis
Eucgr.H03664 0.5kb downstream 0.5kb downstream 500 false Chr08: 50374866-50375365 Eucalyptus grandis
Eucgr.H03664 1.0kb upstream 1.0kb upstream 5199 true Chr08: 50369667-50374865 Eucalyptus grandis
Eucgr.H03664 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50369667-50370666 Eucalyptus grandis
Eucgr.H03664 1.0kb downstream 1.0kb downstream 5199 true Chr08: 50370667-50375865 Eucalyptus grandis
Eucgr.H03664 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50374866-50375865 Eucalyptus grandis
Eucgr.H03664 2.0kb upstream 2.0kb upstream 6199 true Chr08: 50368667-50374865 Eucalyptus grandis
Eucgr.H03664 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50368667-50370666 Eucalyptus grandis
Eucgr.H03664 2.0kb downstream 2.0kb downstream 6199 true Chr08: 50370667-50376865 Eucalyptus grandis
Eucgr.H03664 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50374866-50376865 Eucalyptus grandis
Eucgr.H03664 5.0kb upstream 5.0kb upstream 9199 true Chr08: 50365667-50374865 Eucalyptus grandis
Eucgr.H03664 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50365667-50370666 Eucalyptus grandis
Eucgr.H03664 5.0kb downstream 5.0kb downstream 9199 true Chr08: 50370667-50379865 Eucalyptus grandis
Eucgr.H03664 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50374866-50379865 Eucalyptus grandis
Eucgr.H03664 10.0kb upstream 10.0kb upstream 14199 true Chr08: 50360667-50374865 Eucalyptus grandis
Eucgr.H03664 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50360667-50370666 Eucalyptus grandis
Eucgr.H03664 10.0kb downstream 10.0kb downstream 14199 true Chr08: 50370667-50384865 Eucalyptus grandis
Eucgr.H03664 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50374866-50384865 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069132 5270 Rosid View MSA
123739716 5271 Pentapetalae View MSA
122785691 5272 Eudicot View MSA
122043887 5273 Angiosperm View MSA
121350299 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.4724 0.0 171.581 High High
cufflinks 3.25431 0.0 7.95901    
cufflinks 55.7317 0.0 127.558 High  
cufflinks 1.06648 0.0 2.9103   Low
cufflinks 2.74155 0.0 6.8215    
cufflinks 31.5634 0.0 70.2343    

0 Strain