Gene : Eucgr.H03646 E. grandis v2.0
Defline:  (1 of 10) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  2726
Name:  ? Eucgr.H03646 Secondary Identifier:  ? PAC:32042144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03646 0.5kb upstream 0.5kb upstream 1320 true Chr08: 50188017-50189336 Eucalyptus grandis
Eucgr.H03646 0.5kb upstream 0.5kb upstream 500 false Chr08: 50188837-50189336 Eucalyptus grandis
Eucgr.H03646 0.5kb downstream 0.5kb downstream 1320 true Chr08: 50187517-50188836 Eucalyptus grandis
Eucgr.H03646 0.5kb downstream 0.5kb downstream 500 false Chr08: 50187517-50188016 Eucalyptus grandis
Eucgr.H03646 1.0kb upstream 1.0kb upstream 1820 true Chr08: 50188017-50189836 Eucalyptus grandis
Eucgr.H03646 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50188837-50189836 Eucalyptus grandis
Eucgr.H03646 1.0kb downstream 1.0kb downstream 1820 true Chr08: 50187017-50188836 Eucalyptus grandis
Eucgr.H03646 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50187017-50188016 Eucalyptus grandis
Eucgr.H03646 2.0kb upstream 2.0kb upstream 2820 true Chr08: 50188017-50190836 Eucalyptus grandis
Eucgr.H03646 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50188837-50190836 Eucalyptus grandis
Eucgr.H03646 2.0kb downstream 2.0kb downstream 2820 true Chr08: 50186017-50188836 Eucalyptus grandis
Eucgr.H03646 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50186017-50188016 Eucalyptus grandis
Eucgr.H03646 5.0kb upstream 5.0kb upstream 5820 true Chr08: 50188017-50193836 Eucalyptus grandis
Eucgr.H03646 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50188837-50193836 Eucalyptus grandis
Eucgr.H03646 5.0kb downstream 5.0kb downstream 5820 true Chr08: 50183017-50188836 Eucalyptus grandis
Eucgr.H03646 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50183017-50188016 Eucalyptus grandis
Eucgr.H03646 10.0kb upstream 10.0kb upstream 10820 true Chr08: 50188017-50198836 Eucalyptus grandis
Eucgr.H03646 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50188837-50198836 Eucalyptus grandis
Eucgr.H03646 10.0kb downstream 10.0kb downstream 10820 true Chr08: 50178017-50188836 Eucalyptus grandis
Eucgr.H03646 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50178017-50188016 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.5765 0.0 90.3423 High  
cufflinks 1.35941 0.0 4.37656   Low
cufflinks 72.8537 0.0 162.042 High  
cufflinks 209.763 0.0 469.253 High  
cufflinks 1278.19 0.0 3407.93 High High
cufflinks 17.9578 0.0 43.8836    

0 Strain