Gene : Eucgr.H03637 E. grandis v2.0
Defline:  (1 of 2) PTHR16019 - SYNAPSE-ASSOCIATED PROTEIN Genomic Order:  2717
Name:  ? Eucgr.H03637 Secondary Identifier:  ? PAC:32045295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03637 0.5kb upstream 0.5kb upstream 2362 true Chr08: 50093927-50096288 Eucalyptus grandis
Eucgr.H03637 0.5kb upstream 0.5kb upstream 500 false Chr08: 50095789-50096288 Eucalyptus grandis
Eucgr.H03637 0.5kb downstream 0.5kb downstream 2362 true Chr08: 50093427-50095788 Eucalyptus grandis
Eucgr.H03637 0.5kb downstream 0.5kb downstream 500 false Chr08: 50093427-50093926 Eucalyptus grandis
Eucgr.H03637 1.0kb upstream 1.0kb upstream 2862 true Chr08: 50093927-50096788 Eucalyptus grandis
Eucgr.H03637 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50095789-50096788 Eucalyptus grandis
Eucgr.H03637 1.0kb downstream 1.0kb downstream 2862 true Chr08: 50092927-50095788 Eucalyptus grandis
Eucgr.H03637 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50092927-50093926 Eucalyptus grandis
Eucgr.H03637 2.0kb upstream 2.0kb upstream 3862 true Chr08: 50093927-50097788 Eucalyptus grandis
Eucgr.H03637 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50095789-50097788 Eucalyptus grandis
Eucgr.H03637 2.0kb downstream 2.0kb downstream 3862 true Chr08: 50091927-50095788 Eucalyptus grandis
Eucgr.H03637 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50091927-50093926 Eucalyptus grandis
Eucgr.H03637 5.0kb upstream 5.0kb upstream 6862 true Chr08: 50093927-50100788 Eucalyptus grandis
Eucgr.H03637 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50095789-50100788 Eucalyptus grandis
Eucgr.H03637 5.0kb downstream 5.0kb downstream 6862 true Chr08: 50088927-50095788 Eucalyptus grandis
Eucgr.H03637 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50088927-50093926 Eucalyptus grandis
Eucgr.H03637 10.0kb upstream 10.0kb upstream 11862 true Chr08: 50093927-50105788 Eucalyptus grandis
Eucgr.H03637 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50095789-50105788 Eucalyptus grandis
Eucgr.H03637 10.0kb downstream 10.0kb downstream 11862 true Chr08: 50083927-50095788 Eucalyptus grandis
Eucgr.H03637 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50083927-50093926 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071131 5270 Rosid View MSA
123740161 5271 Pentapetalae View MSA
122791095 5272 Eudicot View MSA
122047719 5273 Angiosperm View MSA
121347355 5274 Embryophyte View MSA
123428249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.944 0.0 42.2134    
cufflinks 27.4935 0.0 60.8788   High
cufflinks 17.5343 0.0 39.2249    
cufflinks 22.3453 0.0 49.6186    
cufflinks 24.069 0.0 53.3943    
cufflinks 9.99189 0.0 22.958   Low

0 Strain