Gene : Eucgr.H03638 E. grandis v2.0
Defline:  (1 of 2) PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  2718
Name:  ? Eucgr.H03638 Secondary Identifier:  ? PAC:32044544
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis BSUBPOLYAMSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-7528 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03638 0.5kb upstream 0.5kb upstream 1640 true Chr08: 50113351-50114990 Eucalyptus grandis
Eucgr.H03638 0.5kb upstream 0.5kb upstream 500 false Chr08: 50113351-50113850 Eucalyptus grandis
Eucgr.H03638 0.5kb downstream 0.5kb downstream 1640 true Chr08: 50113851-50115490 Eucalyptus grandis
Eucgr.H03638 0.5kb downstream 0.5kb downstream 500 false Chr08: 50114991-50115490 Eucalyptus grandis
Eucgr.H03638 1.0kb upstream 1.0kb upstream 2140 true Chr08: 50112851-50114990 Eucalyptus grandis
Eucgr.H03638 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50112851-50113850 Eucalyptus grandis
Eucgr.H03638 1.0kb downstream 1.0kb downstream 2140 true Chr08: 50113851-50115990 Eucalyptus grandis
Eucgr.H03638 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50114991-50115990 Eucalyptus grandis
Eucgr.H03638 2.0kb upstream 2.0kb upstream 3140 true Chr08: 50111851-50114990 Eucalyptus grandis
Eucgr.H03638 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50111851-50113850 Eucalyptus grandis
Eucgr.H03638 2.0kb downstream 2.0kb downstream 3140 true Chr08: 50113851-50116990 Eucalyptus grandis
Eucgr.H03638 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50114991-50116990 Eucalyptus grandis
Eucgr.H03638 5.0kb upstream 5.0kb upstream 6140 true Chr08: 50108851-50114990 Eucalyptus grandis
Eucgr.H03638 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50108851-50113850 Eucalyptus grandis
Eucgr.H03638 5.0kb downstream 5.0kb downstream 6140 true Chr08: 50113851-50119990 Eucalyptus grandis
Eucgr.H03638 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50114991-50119990 Eucalyptus grandis
Eucgr.H03638 10.0kb upstream 10.0kb upstream 11140 true Chr08: 50103851-50114990 Eucalyptus grandis
Eucgr.H03638 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50103851-50113850 Eucalyptus grandis
Eucgr.H03638 10.0kb downstream 10.0kb downstream 11140 true Chr08: 50113851-50124990 Eucalyptus grandis
Eucgr.H03638 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50114991-50124990 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051842 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.922555 0.0 2.87011    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.372214 0.0 1.32178 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain