Gene : Eucgr.H04442 E. grandis v2.0
Defline:  (1 of 8) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  3377
Name:  ? Eucgr.H04442 Secondary Identifier:  ? PAC:32043653
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04442 0.5kb upstream 0.5kb upstream 1555 true Chr08: 60187800-60189354 Eucalyptus grandis
Eucgr.H04442 0.5kb upstream 0.5kb upstream 500 false Chr08: 60187800-60188299 Eucalyptus grandis
Eucgr.H04442 0.5kb downstream 0.5kb downstream 1555 true Chr08: 60188300-60189854 Eucalyptus grandis
Eucgr.H04442 0.5kb downstream 0.5kb downstream 500 false Chr08: 60189355-60189854 Eucalyptus grandis
Eucgr.H04442 1.0kb upstream 1.0kb upstream 2055 true Chr08: 60187300-60189354 Eucalyptus grandis
Eucgr.H04442 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60187300-60188299 Eucalyptus grandis
Eucgr.H04442 1.0kb downstream 1.0kb downstream 2055 true Chr08: 60188300-60190354 Eucalyptus grandis
Eucgr.H04442 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60189355-60190354 Eucalyptus grandis
Eucgr.H04442 2.0kb upstream 2.0kb upstream 3055 true Chr08: 60186300-60189354 Eucalyptus grandis
Eucgr.H04442 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60186300-60188299 Eucalyptus grandis
Eucgr.H04442 2.0kb downstream 2.0kb downstream 3055 true Chr08: 60188300-60191354 Eucalyptus grandis
Eucgr.H04442 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60189355-60191354 Eucalyptus grandis
Eucgr.H04442 5.0kb upstream 5.0kb upstream 6055 true Chr08: 60183300-60189354 Eucalyptus grandis
Eucgr.H04442 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60183300-60188299 Eucalyptus grandis
Eucgr.H04442 5.0kb downstream 5.0kb downstream 6055 true Chr08: 60188300-60194354 Eucalyptus grandis
Eucgr.H04442 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60189355-60194354 Eucalyptus grandis
Eucgr.H04442 10.0kb upstream 10.0kb upstream 11055 true Chr08: 60178300-60189354 Eucalyptus grandis
Eucgr.H04442 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60178300-60188299 Eucalyptus grandis
Eucgr.H04442 10.0kb downstream 10.0kb downstream 11055 true Chr08: 60188300-60199354 Eucalyptus grandis
Eucgr.H04442 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60189355-60199354 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050411 5270 Rosid View MSA
123744267 5271 Pentapetalae View MSA
122796311 5272 Eudicot View MSA
122049726 5273 Angiosperm View MSA
121311560 5274 Embryophyte View MSA
123348840 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.158922 0.0 0.59425 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.079775 0.0 0.361249 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.19986 0.0 10.6546   High

0 Strain