Gene : Eucgr.H04221 E. grandis v2.0
Defline:  (1 of 1) PTHR22884//PTHR22884:SF376 - SET DOMAIN PROTEINS Genomic Order:  3197
Name:  ? Eucgr.H04221 Secondary Identifier:  ? PAC:32044837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04221 0.5kb upstream 0.5kb upstream 4701 true Chr08: 56898096-56902796 Eucalyptus grandis
Eucgr.H04221 0.5kb upstream 0.5kb upstream 500 false Chr08: 56898096-56898595 Eucalyptus grandis
Eucgr.H04221 0.5kb downstream 0.5kb downstream 4701 true Chr08: 56898596-56903296 Eucalyptus grandis
Eucgr.H04221 0.5kb downstream 0.5kb downstream 500 false Chr08: 56902797-56903296 Eucalyptus grandis
Eucgr.H04221 1.0kb upstream 1.0kb upstream 5201 true Chr08: 56897596-56902796 Eucalyptus grandis
Eucgr.H04221 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56897596-56898595 Eucalyptus grandis
Eucgr.H04221 1.0kb downstream 1.0kb downstream 5201 true Chr08: 56898596-56903796 Eucalyptus grandis
Eucgr.H04221 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56902797-56903796 Eucalyptus grandis
Eucgr.H04221 2.0kb upstream 2.0kb upstream 6201 true Chr08: 56896596-56902796 Eucalyptus grandis
Eucgr.H04221 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56896596-56898595 Eucalyptus grandis
Eucgr.H04221 2.0kb downstream 2.0kb downstream 6201 true Chr08: 56898596-56904796 Eucalyptus grandis
Eucgr.H04221 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56902797-56904796 Eucalyptus grandis
Eucgr.H04221 5.0kb upstream 5.0kb upstream 9201 true Chr08: 56893596-56902796 Eucalyptus grandis
Eucgr.H04221 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56893596-56898595 Eucalyptus grandis
Eucgr.H04221 5.0kb downstream 5.0kb downstream 9201 true Chr08: 56898596-56907796 Eucalyptus grandis
Eucgr.H04221 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56902797-56907796 Eucalyptus grandis
Eucgr.H04221 10.0kb upstream 10.0kb upstream 14201 true Chr08: 56888596-56902796 Eucalyptus grandis
Eucgr.H04221 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56888596-56898595 Eucalyptus grandis
Eucgr.H04221 10.0kb downstream 10.0kb downstream 14201 true Chr08: 56898596-56912796 Eucalyptus grandis
Eucgr.H04221 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56902797-56912796 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073861 5270 Rosid View MSA
123746063 5271 Pentapetalae View MSA
122795414 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.49705 0.0 11.1412    
cufflinks 8.09548 0.0 18.7877    
cufflinks 6.18488 0.0 14.7498    
cufflinks 18.162 0.0 40.3513   High
cufflinks 10.965 0.0 24.99    
cufflinks 2.58768 0.0 6.83231   Low

0 Strain