Gene : Eucgr.H04125 E. grandis v2.0
Defline:  (1 of 1) PTHR21262:SF12 - CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Genomic Order:  3114
Name:  ? Eucgr.H04125 Secondary Identifier:  ? PAC:32045173
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04125 0.5kb upstream 0.5kb upstream 3836 true Chr08: 55829575-55833410 Eucalyptus grandis
Eucgr.H04125 0.5kb upstream 0.5kb upstream 500 false Chr08: 55829575-55830074 Eucalyptus grandis
Eucgr.H04125 0.5kb downstream 0.5kb downstream 3836 true Chr08: 55830075-55833910 Eucalyptus grandis
Eucgr.H04125 0.5kb downstream 0.5kb downstream 500 false Chr08: 55833411-55833910 Eucalyptus grandis
Eucgr.H04125 1.0kb upstream 1.0kb upstream 4336 true Chr08: 55829075-55833410 Eucalyptus grandis
Eucgr.H04125 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55829075-55830074 Eucalyptus grandis
Eucgr.H04125 1.0kb downstream 1.0kb downstream 4336 true Chr08: 55830075-55834410 Eucalyptus grandis
Eucgr.H04125 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55833411-55834410 Eucalyptus grandis
Eucgr.H04125 2.0kb upstream 2.0kb upstream 5336 true Chr08: 55828075-55833410 Eucalyptus grandis
Eucgr.H04125 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55828075-55830074 Eucalyptus grandis
Eucgr.H04125 2.0kb downstream 2.0kb downstream 5336 true Chr08: 55830075-55835410 Eucalyptus grandis
Eucgr.H04125 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55833411-55835410 Eucalyptus grandis
Eucgr.H04125 5.0kb upstream 5.0kb upstream 8336 true Chr08: 55825075-55833410 Eucalyptus grandis
Eucgr.H04125 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55825075-55830074 Eucalyptus grandis
Eucgr.H04125 5.0kb downstream 5.0kb downstream 8336 true Chr08: 55830075-55838410 Eucalyptus grandis
Eucgr.H04125 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55833411-55838410 Eucalyptus grandis
Eucgr.H04125 10.0kb upstream 10.0kb upstream 13336 true Chr08: 55820075-55833410 Eucalyptus grandis
Eucgr.H04125 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55820075-55830074 Eucalyptus grandis
Eucgr.H04125 10.0kb downstream 10.0kb downstream 13336 true Chr08: 55830075-55843410 Eucalyptus grandis
Eucgr.H04125 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55833411-55843410 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063676 5270 Rosid View MSA
123740387 5271 Pentapetalae View MSA
122793647 5272 Eudicot View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.74092 0.0 19.9215    
cufflinks 0.29266 0.0 1.08617 Low Low
cufflinks 8.59349 0.0 23.4059    
cufflinks 1.36107 0.0 5.46953    
cufflinks 2.02018 0.0 6.92032    
cufflinks 14.3431 0.0 36.3877   High

0 Strain