Gene : Eucgr.H04128 E. grandis v2.0
Defline:  (1 of 1) PTHR12103:SF15 - PROTEIN Y71H10B.1, ISOFORM C Genomic Order:  3117
Name:  ? Eucgr.H04128 Secondary Identifier:  ? PAC:32044300
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5381 Eucalyptus grandis pathologic  
Egrandis PWY-5695 Eucalyptus grandis pathologic  
Egrandis PWY-6596 Eucalyptus grandis pathologic  
Egrandis PWY-6606 Eucalyptus grandis pathologic  
Egrandis PWY-6608 Eucalyptus grandis pathologic  
Egrandis PWY-7185 Eucalyptus grandis pathologic  
Egrandis SALVADEHYPOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04128 0.5kb upstream 0.5kb upstream 6943 true Chr08: 55846591-55853533 Eucalyptus grandis
Eucgr.H04128 0.5kb upstream 0.5kb upstream 500 false Chr08: 55853034-55853533 Eucalyptus grandis
Eucgr.H04128 0.5kb downstream 0.5kb downstream 6943 true Chr08: 55846091-55853033 Eucalyptus grandis
Eucgr.H04128 0.5kb downstream 0.5kb downstream 500 false Chr08: 55846091-55846590 Eucalyptus grandis
Eucgr.H04128 1.0kb upstream 1.0kb upstream 7443 true Chr08: 55846591-55854033 Eucalyptus grandis
Eucgr.H04128 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55853034-55854033 Eucalyptus grandis
Eucgr.H04128 1.0kb downstream 1.0kb downstream 7443 true Chr08: 55845591-55853033 Eucalyptus grandis
Eucgr.H04128 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55845591-55846590 Eucalyptus grandis
Eucgr.H04128 2.0kb upstream 2.0kb upstream 8443 true Chr08: 55846591-55855033 Eucalyptus grandis
Eucgr.H04128 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55853034-55855033 Eucalyptus grandis
Eucgr.H04128 2.0kb downstream 2.0kb downstream 8443 true Chr08: 55844591-55853033 Eucalyptus grandis
Eucgr.H04128 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55844591-55846590 Eucalyptus grandis
Eucgr.H04128 5.0kb upstream 5.0kb upstream 11443 true Chr08: 55846591-55858033 Eucalyptus grandis
Eucgr.H04128 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55853034-55858033 Eucalyptus grandis
Eucgr.H04128 5.0kb downstream 5.0kb downstream 11443 true Chr08: 55841591-55853033 Eucalyptus grandis
Eucgr.H04128 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55841591-55846590 Eucalyptus grandis
Eucgr.H04128 10.0kb upstream 10.0kb upstream 16443 true Chr08: 55846591-55863033 Eucalyptus grandis
Eucgr.H04128 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55853034-55863033 Eucalyptus grandis
Eucgr.H04128 10.0kb downstream 10.0kb downstream 16443 true Chr08: 55836591-55853033 Eucalyptus grandis
Eucgr.H04128 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55836591-55846590 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068211 5270 Rosid View MSA
123737665 5271 Pentapetalae View MSA
122791643 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5558 0.0 36.7107    
cufflinks 3.0523 0.0 7.59243    
cufflinks 14.8589 0.0 33.0054    
cufflinks 1.83857 0.0 4.80086   Low
cufflinks 3.46327 0.0 8.51469    
cufflinks 24.0411 0.0 53.1755   High

0 Strain