Gene : Eucgr.H04130 E. grandis v2.0
Defline:  (1 of 1) PTHR31342:SF12 - F11A17.16 Genomic Order:  3118
Name:  ? Eucgr.H04130 Secondary Identifier:  ? PAC:32043344
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04130 0.5kb upstream 0.5kb upstream 4827 true Chr08: 55862441-55867267 Eucalyptus grandis
Eucgr.H04130 0.5kb upstream 0.5kb upstream 500 false Chr08: 55862441-55862940 Eucalyptus grandis
Eucgr.H04130 0.5kb downstream 0.5kb downstream 4827 true Chr08: 55862941-55867767 Eucalyptus grandis
Eucgr.H04130 0.5kb downstream 0.5kb downstream 500 false Chr08: 55867268-55867767 Eucalyptus grandis
Eucgr.H04130 1.0kb upstream 1.0kb upstream 5327 true Chr08: 55861941-55867267 Eucalyptus grandis
Eucgr.H04130 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55861941-55862940 Eucalyptus grandis
Eucgr.H04130 1.0kb downstream 1.0kb downstream 5327 true Chr08: 55862941-55868267 Eucalyptus grandis
Eucgr.H04130 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55867268-55868267 Eucalyptus grandis
Eucgr.H04130 2.0kb upstream 2.0kb upstream 6327 true Chr08: 55860941-55867267 Eucalyptus grandis
Eucgr.H04130 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55860941-55862940 Eucalyptus grandis
Eucgr.H04130 2.0kb downstream 2.0kb downstream 6327 true Chr08: 55862941-55869267 Eucalyptus grandis
Eucgr.H04130 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55867268-55869267 Eucalyptus grandis
Eucgr.H04130 5.0kb upstream 5.0kb upstream 9327 true Chr08: 55857941-55867267 Eucalyptus grandis
Eucgr.H04130 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55857941-55862940 Eucalyptus grandis
Eucgr.H04130 5.0kb downstream 5.0kb downstream 9327 true Chr08: 55862941-55872267 Eucalyptus grandis
Eucgr.H04130 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55867268-55872267 Eucalyptus grandis
Eucgr.H04130 10.0kb upstream 10.0kb upstream 14327 true Chr08: 55852941-55867267 Eucalyptus grandis
Eucgr.H04130 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55852941-55862940 Eucalyptus grandis
Eucgr.H04130 10.0kb downstream 10.0kb downstream 14327 true Chr08: 55862941-55877267 Eucalyptus grandis
Eucgr.H04130 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55867268-55877267 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.39274 0.0 8.3162    
cufflinks 13.6354 0.0 30.5877   High
cufflinks 2.46921 0.0 6.33482    
cufflinks 6.63669 0.0 18.2333    
cufflinks 2.54964 0.0 6.48835    
cufflinks 5.78586 0.0 13.4212    

0 Strain