Gene : Eucgr.H04108 E. grandis v2.0
Defline:  (1 of 1) PTHR24115:SF417 - PHRAGMOPLAST ORIENTING KINESIN-1 Genomic Order:  3098
Name:  ? Eucgr.H04108 Secondary Identifier:  ? PAC:32044621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04108 0.5kb upstream 0.5kb upstream 9047 true Chr08: 55662583-55671629 Eucalyptus grandis
Eucgr.H04108 0.5kb upstream 0.5kb upstream 500 false Chr08: 55662583-55663082 Eucalyptus grandis
Eucgr.H04108 0.5kb downstream 0.5kb downstream 9047 true Chr08: 55663083-55672129 Eucalyptus grandis
Eucgr.H04108 0.5kb downstream 0.5kb downstream 500 false Chr08: 55671630-55672129 Eucalyptus grandis
Eucgr.H04108 1.0kb upstream 1.0kb upstream 9547 true Chr08: 55662083-55671629 Eucalyptus grandis
Eucgr.H04108 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55662083-55663082 Eucalyptus grandis
Eucgr.H04108 1.0kb downstream 1.0kb downstream 9547 true Chr08: 55663083-55672629 Eucalyptus grandis
Eucgr.H04108 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55671630-55672629 Eucalyptus grandis
Eucgr.H04108 2.0kb upstream 2.0kb upstream 10547 true Chr08: 55661083-55671629 Eucalyptus grandis
Eucgr.H04108 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55661083-55663082 Eucalyptus grandis
Eucgr.H04108 2.0kb downstream 2.0kb downstream 10547 true Chr08: 55663083-55673629 Eucalyptus grandis
Eucgr.H04108 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55671630-55673629 Eucalyptus grandis
Eucgr.H04108 5.0kb upstream 5.0kb upstream 13547 true Chr08: 55658083-55671629 Eucalyptus grandis
Eucgr.H04108 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55658083-55663082 Eucalyptus grandis
Eucgr.H04108 5.0kb downstream 5.0kb downstream 13547 true Chr08: 55663083-55676629 Eucalyptus grandis
Eucgr.H04108 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55671630-55676629 Eucalyptus grandis
Eucgr.H04108 10.0kb upstream 10.0kb upstream 18547 true Chr08: 55653083-55671629 Eucalyptus grandis
Eucgr.H04108 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55653083-55663082 Eucalyptus grandis
Eucgr.H04108 10.0kb downstream 10.0kb downstream 18547 true Chr08: 55663083-55681629 Eucalyptus grandis
Eucgr.H04108 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55671630-55681629 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051384 5270 Rosid View MSA
123749768 5271 Pentapetalae View MSA
122792500 5272 Eudicot View MSA
122048551 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350480 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.21743 0.0 7.38702   High
cufflinks 0.691547 0.0 1.82733 Low  
cufflinks 1.08575 0.0 2.74258    
cufflinks 0.306027 0.0 0.873795 Low Low
cufflinks 2.57915 0.0 6.00873   High
cufflinks 0.388152 0.0 1.09838 Low  

0 Strain