Gene : Eucgr.H04106 E. grandis v2.0
Defline:  (1 of 1) PTHR23249:SF15 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4 Genomic Order:  3096
Name:  ? Eucgr.H04106 Secondary Identifier:  ? PAC:32045517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04106 0.5kb upstream 0.5kb upstream 4057 true Chr08: 55639861-55643917 Eucalyptus grandis
Eucgr.H04106 0.5kb upstream 0.5kb upstream 500 false Chr08: 55639861-55640360 Eucalyptus grandis
Eucgr.H04106 0.5kb downstream 0.5kb downstream 4057 true Chr08: 55640361-55644417 Eucalyptus grandis
Eucgr.H04106 0.5kb downstream 0.5kb downstream 500 false Chr08: 55643918-55644417 Eucalyptus grandis
Eucgr.H04106 1.0kb upstream 1.0kb upstream 4557 true Chr08: 55639361-55643917 Eucalyptus grandis
Eucgr.H04106 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55639361-55640360 Eucalyptus grandis
Eucgr.H04106 1.0kb downstream 1.0kb downstream 4557 true Chr08: 55640361-55644917 Eucalyptus grandis
Eucgr.H04106 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55643918-55644917 Eucalyptus grandis
Eucgr.H04106 2.0kb upstream 2.0kb upstream 5557 true Chr08: 55638361-55643917 Eucalyptus grandis
Eucgr.H04106 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55638361-55640360 Eucalyptus grandis
Eucgr.H04106 2.0kb downstream 2.0kb downstream 5557 true Chr08: 55640361-55645917 Eucalyptus grandis
Eucgr.H04106 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55643918-55645917 Eucalyptus grandis
Eucgr.H04106 5.0kb upstream 5.0kb upstream 8557 true Chr08: 55635361-55643917 Eucalyptus grandis
Eucgr.H04106 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55635361-55640360 Eucalyptus grandis
Eucgr.H04106 5.0kb downstream 5.0kb downstream 8557 true Chr08: 55640361-55648917 Eucalyptus grandis
Eucgr.H04106 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55643918-55648917 Eucalyptus grandis
Eucgr.H04106 10.0kb upstream 10.0kb upstream 13557 true Chr08: 55630361-55643917 Eucalyptus grandis
Eucgr.H04106 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55630361-55640360 Eucalyptus grandis
Eucgr.H04106 10.0kb downstream 10.0kb downstream 13557 true Chr08: 55640361-55653917 Eucalyptus grandis
Eucgr.H04106 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55643918-55653917 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062773 5270 Rosid View MSA
123740967 5271 Pentapetalae View MSA
122786625 5272 Eudicot View MSA
122043161 5273 Angiosperm View MSA
121347078 5274 Embryophyte View MSA
123424121 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.2128 0.0 47.2767    
cufflinks 39.4597 0.0 88.359    
cufflinks 21.227 0.0 49.5057    
cufflinks 76.1569 0.0 168.416 High High
cufflinks 33.277 0.0 75.2396    
cufflinks 14.4181 0.0 34.7399   Low

0 Strain