Gene : Eucgr.H04960 E. grandis v2.0
Defline:  (1 of 1) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  3927
Name:  ? Eucgr.H04960 Secondary Identifier:  ? PAC:32041394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04960 0.5kb upstream 0.5kb upstream 11212 true Chr08: 69045558-69056769 Eucalyptus grandis
Eucgr.H04960 0.5kb upstream 0.5kb upstream 500 false Chr08: 69056270-69056769 Eucalyptus grandis
Eucgr.H04960 0.5kb downstream 0.5kb downstream 11212 true Chr08: 69045058-69056269 Eucalyptus grandis
Eucgr.H04960 0.5kb downstream 0.5kb downstream 500 false Chr08: 69045058-69045557 Eucalyptus grandis
Eucgr.H04960 1.0kb upstream 1.0kb upstream 11712 true Chr08: 69045558-69057269 Eucalyptus grandis
Eucgr.H04960 1.0kb upstream 1.0kb upstream 1000 false Chr08: 69056270-69057269 Eucalyptus grandis
Eucgr.H04960 1.0kb downstream 1.0kb downstream 11712 true Chr08: 69044558-69056269 Eucalyptus grandis
Eucgr.H04960 1.0kb downstream 1.0kb downstream 1000 false Chr08: 69044558-69045557 Eucalyptus grandis
Eucgr.H04960 2.0kb upstream 2.0kb upstream 12712 true Chr08: 69045558-69058269 Eucalyptus grandis
Eucgr.H04960 2.0kb upstream 2.0kb upstream 2000 false Chr08: 69056270-69058269 Eucalyptus grandis
Eucgr.H04960 2.0kb downstream 2.0kb downstream 12712 true Chr08: 69043558-69056269 Eucalyptus grandis
Eucgr.H04960 2.0kb downstream 2.0kb downstream 2000 false Chr08: 69043558-69045557 Eucalyptus grandis
Eucgr.H04960 5.0kb upstream 5.0kb upstream 15712 true Chr08: 69045558-69061269 Eucalyptus grandis
Eucgr.H04960 5.0kb upstream 5.0kb upstream 5000 false Chr08: 69056270-69061269 Eucalyptus grandis
Eucgr.H04960 5.0kb downstream 5.0kb downstream 15712 true Chr08: 69040558-69056269 Eucalyptus grandis
Eucgr.H04960 5.0kb downstream 5.0kb downstream 5000 false Chr08: 69040558-69045557 Eucalyptus grandis
Eucgr.H04960 10.0kb upstream 10.0kb upstream 20712 true Chr08: 69045558-69066269 Eucalyptus grandis
Eucgr.H04960 10.0kb upstream 10.0kb upstream 10000 false Chr08: 69056270-69066269 Eucalyptus grandis
Eucgr.H04960 10.0kb downstream 10.0kb downstream 20712 true Chr08: 69035558-69056269 Eucalyptus grandis
Eucgr.H04960 10.0kb downstream 10.0kb downstream 10000 false Chr08: 69035558-69045557 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066007 5270 Rosid View MSA
123738416 5271 Pentapetalae View MSA
122790727 5272 Eudicot View MSA
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.63235 0.0 26.13    
cufflinks 3.02058 0.0 9.06193    
cufflinks 8.04016 0.0 20.254    
cufflinks 2.80667 0.0 7.76778   Low
cufflinks 3.35426 0.0 8.87586    
cufflinks 10.2222 0.0 26.2811   High

0 Strain