Gene : Eucgr.H04963 E. grandis v2.0
Defline:  (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED Genomic Order:  3930
Name:  ? Eucgr.H04963 Secondary Identifier:  ? PAC:32042337
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04963 0.5kb upstream 0.5kb upstream 3382 true Chr08: 69128318-69131699 Eucalyptus grandis
Eucgr.H04963 0.5kb upstream 0.5kb upstream 500 false Chr08: 69128318-69128817 Eucalyptus grandis
Eucgr.H04963 0.5kb downstream 0.5kb downstream 3382 true Chr08: 69128818-69132199 Eucalyptus grandis
Eucgr.H04963 0.5kb downstream 0.5kb downstream 500 false Chr08: 69131700-69132199 Eucalyptus grandis
Eucgr.H04963 1.0kb upstream 1.0kb upstream 3882 true Chr08: 69127818-69131699 Eucalyptus grandis
Eucgr.H04963 1.0kb upstream 1.0kb upstream 1000 false Chr08: 69127818-69128817 Eucalyptus grandis
Eucgr.H04963 1.0kb downstream 1.0kb downstream 3882 true Chr08: 69128818-69132699 Eucalyptus grandis
Eucgr.H04963 1.0kb downstream 1.0kb downstream 1000 false Chr08: 69131700-69132699 Eucalyptus grandis
Eucgr.H04963 2.0kb upstream 2.0kb upstream 4882 true Chr08: 69126818-69131699 Eucalyptus grandis
Eucgr.H04963 2.0kb upstream 2.0kb upstream 2000 false Chr08: 69126818-69128817 Eucalyptus grandis
Eucgr.H04963 2.0kb downstream 2.0kb downstream 4882 true Chr08: 69128818-69133699 Eucalyptus grandis
Eucgr.H04963 2.0kb downstream 2.0kb downstream 2000 false Chr08: 69131700-69133699 Eucalyptus grandis
Eucgr.H04963 5.0kb upstream 5.0kb upstream 7882 true Chr08: 69123818-69131699 Eucalyptus grandis
Eucgr.H04963 5.0kb upstream 5.0kb upstream 5000 false Chr08: 69123818-69128817 Eucalyptus grandis
Eucgr.H04963 5.0kb downstream 5.0kb downstream 7882 true Chr08: 69128818-69136699 Eucalyptus grandis
Eucgr.H04963 5.0kb downstream 5.0kb downstream 5000 false Chr08: 69131700-69136699 Eucalyptus grandis
Eucgr.H04963 10.0kb upstream 10.0kb upstream 12882 true Chr08: 69118818-69131699 Eucalyptus grandis
Eucgr.H04963 10.0kb upstream 10.0kb upstream 10000 false Chr08: 69118818-69128817 Eucalyptus grandis
Eucgr.H04963 10.0kb downstream 10.0kb downstream 12882 true Chr08: 69128818-69141699 Eucalyptus grandis
Eucgr.H04963 10.0kb downstream 10.0kb downstream 10000 false Chr08: 69131700-69141699 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068668 5270 Rosid View MSA
123740105 5271 Pentapetalae View MSA
122792386 5272 Eudicot View MSA
122043083 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.72823 0.0 4.62789    
cufflinks 2.18021 0.0 5.67604    
cufflinks 1.60487 0.0 4.31891    
cufflinks 4.6125 0.0 11.1333   High
cufflinks 3.50559 0.0 8.72257    
cufflinks 1.0167 0.0 2.87701   Low

0 Strain