Gene : Eucgr.H04890 E. grandis v2.0
Defline:  (1 of 1) PTHR24006:SF455 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 27 Genomic Order:  3868
Name:  ? Eucgr.H04890 Secondary Identifier:  ? PAC:32043609
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04890 0.5kb upstream 0.5kb upstream 6055 true Chr08: 68063039-68069093 Eucalyptus grandis
Eucgr.H04890 0.5kb upstream 0.5kb upstream 500 false Chr08: 68068594-68069093 Eucalyptus grandis
Eucgr.H04890 0.5kb downstream 0.5kb downstream 6055 true Chr08: 68062539-68068593 Eucalyptus grandis
Eucgr.H04890 0.5kb downstream 0.5kb downstream 500 false Chr08: 68062539-68063038 Eucalyptus grandis
Eucgr.H04890 1.0kb upstream 1.0kb upstream 6555 true Chr08: 68063039-68069593 Eucalyptus grandis
Eucgr.H04890 1.0kb upstream 1.0kb upstream 1000 false Chr08: 68068594-68069593 Eucalyptus grandis
Eucgr.H04890 1.0kb downstream 1.0kb downstream 6555 true Chr08: 68062039-68068593 Eucalyptus grandis
Eucgr.H04890 1.0kb downstream 1.0kb downstream 1000 false Chr08: 68062039-68063038 Eucalyptus grandis
Eucgr.H04890 2.0kb upstream 2.0kb upstream 7555 true Chr08: 68063039-68070593 Eucalyptus grandis
Eucgr.H04890 2.0kb upstream 2.0kb upstream 2000 false Chr08: 68068594-68070593 Eucalyptus grandis
Eucgr.H04890 2.0kb downstream 2.0kb downstream 7555 true Chr08: 68061039-68068593 Eucalyptus grandis
Eucgr.H04890 2.0kb downstream 2.0kb downstream 2000 false Chr08: 68061039-68063038 Eucalyptus grandis
Eucgr.H04890 5.0kb upstream 5.0kb upstream 10555 true Chr08: 68063039-68073593 Eucalyptus grandis
Eucgr.H04890 5.0kb upstream 5.0kb upstream 5000 false Chr08: 68068594-68073593 Eucalyptus grandis
Eucgr.H04890 5.0kb downstream 5.0kb downstream 10555 true Chr08: 68058039-68068593 Eucalyptus grandis
Eucgr.H04890 5.0kb downstream 5.0kb downstream 5000 false Chr08: 68058039-68063038 Eucalyptus grandis
Eucgr.H04890 10.0kb upstream 10.0kb upstream 15555 true Chr08: 68063039-68078593 Eucalyptus grandis
Eucgr.H04890 10.0kb upstream 10.0kb upstream 10000 false Chr08: 68068594-68078593 Eucalyptus grandis
Eucgr.H04890 10.0kb downstream 10.0kb downstream 15555 true Chr08: 68053039-68068593 Eucalyptus grandis
Eucgr.H04890 10.0kb downstream 10.0kb downstream 10000 false Chr08: 68053039-68063038 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041324 5273 Angiosperm View MSA
124063366 5270 Rosid View MSA
123746952 5271 Pentapetalae View MSA
122793650 5272 Eudicot View MSA
121348941 5274 Embryophyte View MSA
123381089 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.97997 0.0 11.8492    
cufflinks 0.260274 0.0 0.965978 Low Low
cufflinks 5.6344 0.0 13.2029    
cufflinks 1.90941 0.0 5.14968    
cufflinks 2.05483 0.0 5.60483    
cufflinks 5.9137 0.0 14.2261    

0 Strain