Gene : Eucgr.H04883 E. grandis v2.0
Defline:  (1 of 10) PF14559 - Tetratricopeptide repeat (TPR_19) Genomic Order:  3862
Name:  ? Eucgr.H04883 Secondary Identifier:  ? PAC:32045024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04883 0.5kb upstream 0.5kb upstream 3731 true Chr08: 68010746-68014476 Eucalyptus grandis
Eucgr.H04883 0.5kb upstream 0.5kb upstream 500 false Chr08: 68010746-68011245 Eucalyptus grandis
Eucgr.H04883 0.5kb downstream 0.5kb downstream 3731 true Chr08: 68011246-68014976 Eucalyptus grandis
Eucgr.H04883 0.5kb downstream 0.5kb downstream 500 false Chr08: 68014477-68014976 Eucalyptus grandis
Eucgr.H04883 1.0kb upstream 1.0kb upstream 4231 true Chr08: 68010246-68014476 Eucalyptus grandis
Eucgr.H04883 1.0kb upstream 1.0kb upstream 1000 false Chr08: 68010246-68011245 Eucalyptus grandis
Eucgr.H04883 1.0kb downstream 1.0kb downstream 4231 true Chr08: 68011246-68015476 Eucalyptus grandis
Eucgr.H04883 1.0kb downstream 1.0kb downstream 1000 false Chr08: 68014477-68015476 Eucalyptus grandis
Eucgr.H04883 2.0kb upstream 2.0kb upstream 5231 true Chr08: 68009246-68014476 Eucalyptus grandis
Eucgr.H04883 2.0kb upstream 2.0kb upstream 2000 false Chr08: 68009246-68011245 Eucalyptus grandis
Eucgr.H04883 2.0kb downstream 2.0kb downstream 5231 true Chr08: 68011246-68016476 Eucalyptus grandis
Eucgr.H04883 2.0kb downstream 2.0kb downstream 2000 false Chr08: 68014477-68016476 Eucalyptus grandis
Eucgr.H04883 5.0kb upstream 5.0kb upstream 8231 true Chr08: 68006246-68014476 Eucalyptus grandis
Eucgr.H04883 5.0kb upstream 5.0kb upstream 5000 false Chr08: 68006246-68011245 Eucalyptus grandis
Eucgr.H04883 5.0kb downstream 5.0kb downstream 8231 true Chr08: 68011246-68019476 Eucalyptus grandis
Eucgr.H04883 5.0kb downstream 5.0kb downstream 5000 false Chr08: 68014477-68019476 Eucalyptus grandis
Eucgr.H04883 10.0kb upstream 10.0kb upstream 13231 true Chr08: 68001246-68014476 Eucalyptus grandis
Eucgr.H04883 10.0kb upstream 10.0kb upstream 10000 false Chr08: 68001246-68011245 Eucalyptus grandis
Eucgr.H04883 10.0kb downstream 10.0kb downstream 13231 true Chr08: 68011246-68024476 Eucalyptus grandis
Eucgr.H04883 10.0kb downstream 10.0kb downstream 10000 false Chr08: 68014477-68024476 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065454 5270 Rosid View MSA
123736679 5271 Pentapetalae View MSA
122790556 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.48859 0.0 20.582    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.90569 0.0 15.0333    
cufflinks 0.94428 0.0 3.15271   Low
cufflinks 1.52851 0.0 5.76232    
cufflinks 11.3569 0.0 30.2223   High

0 Strain