Gene : Eucgr.H04780 E. grandis v2.0
Defline:  (1 of 1) PTHR33477:SF2 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  3778
Name:  ? Eucgr.H04780 Secondary Identifier:  ? PAC:32044656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04780 0.5kb upstream 0.5kb upstream 7742 true Chr08: 66760066-66767807 Eucalyptus grandis
Eucgr.H04780 0.5kb upstream 0.5kb upstream 500 false Chr08: 66760066-66760565 Eucalyptus grandis
Eucgr.H04780 0.5kb downstream 0.5kb downstream 7742 true Chr08: 66760566-66768307 Eucalyptus grandis
Eucgr.H04780 0.5kb downstream 0.5kb downstream 500 false Chr08: 66767808-66768307 Eucalyptus grandis
Eucgr.H04780 1.0kb upstream 1.0kb upstream 8242 true Chr08: 66759566-66767807 Eucalyptus grandis
Eucgr.H04780 1.0kb upstream 1.0kb upstream 1000 false Chr08: 66759566-66760565 Eucalyptus grandis
Eucgr.H04780 1.0kb downstream 1.0kb downstream 8242 true Chr08: 66760566-66768807 Eucalyptus grandis
Eucgr.H04780 1.0kb downstream 1.0kb downstream 1000 false Chr08: 66767808-66768807 Eucalyptus grandis
Eucgr.H04780 2.0kb upstream 2.0kb upstream 9242 true Chr08: 66758566-66767807 Eucalyptus grandis
Eucgr.H04780 2.0kb upstream 2.0kb upstream 2000 false Chr08: 66758566-66760565 Eucalyptus grandis
Eucgr.H04780 2.0kb downstream 2.0kb downstream 9242 true Chr08: 66760566-66769807 Eucalyptus grandis
Eucgr.H04780 2.0kb downstream 2.0kb downstream 2000 false Chr08: 66767808-66769807 Eucalyptus grandis
Eucgr.H04780 5.0kb upstream 5.0kb upstream 12242 true Chr08: 66755566-66767807 Eucalyptus grandis
Eucgr.H04780 5.0kb upstream 5.0kb upstream 5000 false Chr08: 66755566-66760565 Eucalyptus grandis
Eucgr.H04780 5.0kb downstream 5.0kb downstream 12242 true Chr08: 66760566-66772807 Eucalyptus grandis
Eucgr.H04780 5.0kb downstream 5.0kb downstream 5000 false Chr08: 66767808-66772807 Eucalyptus grandis
Eucgr.H04780 10.0kb upstream 10.0kb upstream 17242 true Chr08: 66750566-66767807 Eucalyptus grandis
Eucgr.H04780 10.0kb upstream 10.0kb upstream 10000 false Chr08: 66750566-66760565 Eucalyptus grandis
Eucgr.H04780 10.0kb downstream 10.0kb downstream 17242 true Chr08: 66760566-66777807 Eucalyptus grandis
Eucgr.H04780 10.0kb downstream 10.0kb downstream 10000 false Chr08: 66767808-66777807 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065371 5270 Rosid View MSA
123736809 5271 Pentapetalae View MSA
122793373 5272 Eudicot View MSA
122047175 5273 Angiosperm View MSA
121349893 5274 Embryophyte View MSA
123424607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4985 0.0 47.6205    
cufflinks 37.6435 0.0 103.183   High
cufflinks 16.7851 0.0 44.7028    
cufflinks 33.9108 0.0 86.1512   High
cufflinks 19.0864 0.0 48.5768    
cufflinks 13.3293 0.0 35.2772   Low

0 Strain