Gene : Eucgr.H04770 E. grandis v2.0
Defline:  (1 of 19) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  3769
Name:  ? Eucgr.H04770 Secondary Identifier:  ? PAC:32042705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04770 0.5kb upstream 0.5kb upstream 8627 true Chr08: 66722606-66731232 Eucalyptus grandis
Eucgr.H04770 0.5kb upstream 0.5kb upstream 500 false Chr08: 66722606-66723105 Eucalyptus grandis
Eucgr.H04770 0.5kb downstream 0.5kb downstream 8627 true Chr08: 66723106-66731732 Eucalyptus grandis
Eucgr.H04770 0.5kb downstream 0.5kb downstream 500 false Chr08: 66731233-66731732 Eucalyptus grandis
Eucgr.H04770 1.0kb upstream 1.0kb upstream 9127 true Chr08: 66722106-66731232 Eucalyptus grandis
Eucgr.H04770 1.0kb upstream 1.0kb upstream 1000 false Chr08: 66722106-66723105 Eucalyptus grandis
Eucgr.H04770 1.0kb downstream 1.0kb downstream 9127 true Chr08: 66723106-66732232 Eucalyptus grandis
Eucgr.H04770 1.0kb downstream 1.0kb downstream 1000 false Chr08: 66731233-66732232 Eucalyptus grandis
Eucgr.H04770 2.0kb upstream 2.0kb upstream 10127 true Chr08: 66721106-66731232 Eucalyptus grandis
Eucgr.H04770 2.0kb upstream 2.0kb upstream 2000 false Chr08: 66721106-66723105 Eucalyptus grandis
Eucgr.H04770 2.0kb downstream 2.0kb downstream 10127 true Chr08: 66723106-66733232 Eucalyptus grandis
Eucgr.H04770 2.0kb downstream 2.0kb downstream 2000 false Chr08: 66731233-66733232 Eucalyptus grandis
Eucgr.H04770 5.0kb upstream 5.0kb upstream 13127 true Chr08: 66718106-66731232 Eucalyptus grandis
Eucgr.H04770 5.0kb upstream 5.0kb upstream 5000 false Chr08: 66718106-66723105 Eucalyptus grandis
Eucgr.H04770 5.0kb downstream 5.0kb downstream 13127 true Chr08: 66723106-66736232 Eucalyptus grandis
Eucgr.H04770 5.0kb downstream 5.0kb downstream 5000 false Chr08: 66731233-66736232 Eucalyptus grandis
Eucgr.H04770 10.0kb upstream 10.0kb upstream 18127 true Chr08: 66713106-66731232 Eucalyptus grandis
Eucgr.H04770 10.0kb upstream 10.0kb upstream 10000 false Chr08: 66713106-66723105 Eucalyptus grandis
Eucgr.H04770 10.0kb downstream 10.0kb downstream 18127 true Chr08: 66723106-66741232 Eucalyptus grandis
Eucgr.H04770 10.0kb downstream 10.0kb downstream 10000 false Chr08: 66731233-66741232 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067681 5270 Rosid View MSA
123741016 5271 Pentapetalae View MSA
122789331 5272 Eudicot View MSA
122048436 5273 Angiosperm View MSA
121352410 5274 Embryophyte View MSA
123382754 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4396 0.0 35.9172    
cufflinks 18.5151 0.0 41.7376   High
cufflinks 11.8574 0.0 30.3063    
cufflinks 13.0313 0.0 33.9349    
cufflinks 8.15604 0.0 18.7171   Low
cufflinks 18.3275 0.0 42.3634    

0 Strain