Gene : Eucgr.H04723 E. grandis v2.0
Defline:  (1 of 1) PTHR13060 - SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 Genomic Order:  3727
Name:  ? Eucgr.H04723 Secondary Identifier:  ? PAC:32042865
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04723 0.5kb upstream 0.5kb upstream 5771 true Chr08: 66233778-66239548 Eucalyptus grandis
Eucgr.H04723 0.5kb upstream 0.5kb upstream 500 false Chr08: 66233778-66234277 Eucalyptus grandis
Eucgr.H04723 0.5kb downstream 0.5kb downstream 5771 true Chr08: 66234278-66240048 Eucalyptus grandis
Eucgr.H04723 0.5kb downstream 0.5kb downstream 500 false Chr08: 66239549-66240048 Eucalyptus grandis
Eucgr.H04723 1.0kb upstream 1.0kb upstream 6271 true Chr08: 66233278-66239548 Eucalyptus grandis
Eucgr.H04723 1.0kb upstream 1.0kb upstream 1000 false Chr08: 66233278-66234277 Eucalyptus grandis
Eucgr.H04723 1.0kb downstream 1.0kb downstream 6271 true Chr08: 66234278-66240548 Eucalyptus grandis
Eucgr.H04723 1.0kb downstream 1.0kb downstream 1000 false Chr08: 66239549-66240548 Eucalyptus grandis
Eucgr.H04723 2.0kb upstream 2.0kb upstream 7271 true Chr08: 66232278-66239548 Eucalyptus grandis
Eucgr.H04723 2.0kb upstream 2.0kb upstream 2000 false Chr08: 66232278-66234277 Eucalyptus grandis
Eucgr.H04723 2.0kb downstream 2.0kb downstream 7271 true Chr08: 66234278-66241548 Eucalyptus grandis
Eucgr.H04723 2.0kb downstream 2.0kb downstream 2000 false Chr08: 66239549-66241548 Eucalyptus grandis
Eucgr.H04723 5.0kb upstream 5.0kb upstream 10271 true Chr08: 66229278-66239548 Eucalyptus grandis
Eucgr.H04723 5.0kb upstream 5.0kb upstream 5000 false Chr08: 66229278-66234277 Eucalyptus grandis
Eucgr.H04723 5.0kb downstream 5.0kb downstream 10271 true Chr08: 66234278-66244548 Eucalyptus grandis
Eucgr.H04723 5.0kb downstream 5.0kb downstream 5000 false Chr08: 66239549-66244548 Eucalyptus grandis
Eucgr.H04723 10.0kb upstream 10.0kb upstream 15271 true Chr08: 66224278-66239548 Eucalyptus grandis
Eucgr.H04723 10.0kb upstream 10.0kb upstream 10000 false Chr08: 66224278-66234277 Eucalyptus grandis
Eucgr.H04723 10.0kb downstream 10.0kb downstream 15271 true Chr08: 66234278-66249548 Eucalyptus grandis
Eucgr.H04723 10.0kb downstream 10.0kb downstream 10000 false Chr08: 66239549-66249548 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072194 5270 Rosid View MSA
123740362 5271 Pentapetalae View MSA
122792261 5272 Eudicot View MSA
122046439 5273 Angiosperm View MSA
121348661 5274 Embryophyte View MSA
123424797 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.25287 0.0 21.0043    
cufflinks 7.93894 0.0 18.2517   Low
cufflinks 9.73327 0.0 22.0399    
cufflinks 12.5575 0.0 28.0856   High
cufflinks 13.1811 0.0 29.4402   High
cufflinks 10.3286 0.0 23.2568    

0 Strain