Gene : Eucgr.H04740 E. grandis v2.0
Defline:  (1 of 1) PTHR18934:SF140 - HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  3743
Name:  ? Eucgr.H04740 Secondary Identifier:  ? PAC:32042770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04740 0.5kb upstream 0.5kb upstream 6557 true Chr08: 66389226-66395782 Eucalyptus grandis
Eucgr.H04740 0.5kb upstream 0.5kb upstream 500 false Chr08: 66395283-66395782 Eucalyptus grandis
Eucgr.H04740 0.5kb downstream 0.5kb downstream 6557 true Chr08: 66388726-66395282 Eucalyptus grandis
Eucgr.H04740 0.5kb downstream 0.5kb downstream 500 false Chr08: 66388726-66389225 Eucalyptus grandis
Eucgr.H04740 1.0kb upstream 1.0kb upstream 7057 true Chr08: 66389226-66396282 Eucalyptus grandis
Eucgr.H04740 1.0kb upstream 1.0kb upstream 1000 false Chr08: 66395283-66396282 Eucalyptus grandis
Eucgr.H04740 1.0kb downstream 1.0kb downstream 7057 true Chr08: 66388226-66395282 Eucalyptus grandis
Eucgr.H04740 1.0kb downstream 1.0kb downstream 1000 false Chr08: 66388226-66389225 Eucalyptus grandis
Eucgr.H04740 2.0kb upstream 2.0kb upstream 8057 true Chr08: 66389226-66397282 Eucalyptus grandis
Eucgr.H04740 2.0kb upstream 2.0kb upstream 2000 false Chr08: 66395283-66397282 Eucalyptus grandis
Eucgr.H04740 2.0kb downstream 2.0kb downstream 8057 true Chr08: 66387226-66395282 Eucalyptus grandis
Eucgr.H04740 2.0kb downstream 2.0kb downstream 2000 false Chr08: 66387226-66389225 Eucalyptus grandis
Eucgr.H04740 5.0kb upstream 5.0kb upstream 11057 true Chr08: 66389226-66400282 Eucalyptus grandis
Eucgr.H04740 5.0kb upstream 5.0kb upstream 5000 false Chr08: 66395283-66400282 Eucalyptus grandis
Eucgr.H04740 5.0kb downstream 5.0kb downstream 11057 true Chr08: 66384226-66395282 Eucalyptus grandis
Eucgr.H04740 5.0kb downstream 5.0kb downstream 5000 false Chr08: 66384226-66389225 Eucalyptus grandis
Eucgr.H04740 10.0kb upstream 10.0kb upstream 16057 true Chr08: 66389226-66405282 Eucalyptus grandis
Eucgr.H04740 10.0kb upstream 10.0kb upstream 10000 false Chr08: 66395283-66405282 Eucalyptus grandis
Eucgr.H04740 10.0kb downstream 10.0kb downstream 16057 true Chr08: 66379226-66395282 Eucalyptus grandis
Eucgr.H04740 10.0kb downstream 10.0kb downstream 10000 false Chr08: 66379226-66389225 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065250 5270 Rosid View MSA
123737649 5271 Pentapetalae View MSA
122792677 5272 Eudicot View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.08131 0.0 7.17944    
cufflinks 5.94657 0.0 13.2606   High
cufflinks 3.45173 0.0 7.93586    
cufflinks 3.76172 0.0 8.55917    
cufflinks 2.73977 0.0 6.41769   Low
cufflinks 4.50387 0.0 10.2476    

0 Strain