Gene : Eucgr.H04680 E. grandis v2.0
Defline:  (1 of 3) PTHR10257:SF26 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B' DELTA ISOFORM Genomic Order:  3694
Name:  ? Eucgr.H04680 Secondary Identifier:  ? PAC:32043155
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04680 0.5kb upstream 0.5kb upstream 6641 true Chr08: 65703660-65710300 Eucalyptus grandis
Eucgr.H04680 0.5kb upstream 0.5kb upstream 500 false Chr08: 65703660-65704159 Eucalyptus grandis
Eucgr.H04680 0.5kb downstream 0.5kb downstream 6641 true Chr08: 65704160-65710800 Eucalyptus grandis
Eucgr.H04680 0.5kb downstream 0.5kb downstream 500 false Chr08: 65710301-65710800 Eucalyptus grandis
Eucgr.H04680 1.0kb upstream 1.0kb upstream 7141 true Chr08: 65703160-65710300 Eucalyptus grandis
Eucgr.H04680 1.0kb upstream 1.0kb upstream 1000 false Chr08: 65703160-65704159 Eucalyptus grandis
Eucgr.H04680 1.0kb downstream 1.0kb downstream 7141 true Chr08: 65704160-65711300 Eucalyptus grandis
Eucgr.H04680 1.0kb downstream 1.0kb downstream 1000 false Chr08: 65710301-65711300 Eucalyptus grandis
Eucgr.H04680 2.0kb upstream 2.0kb upstream 8141 true Chr08: 65702160-65710300 Eucalyptus grandis
Eucgr.H04680 2.0kb upstream 2.0kb upstream 2000 false Chr08: 65702160-65704159 Eucalyptus grandis
Eucgr.H04680 2.0kb downstream 2.0kb downstream 8141 true Chr08: 65704160-65712300 Eucalyptus grandis
Eucgr.H04680 2.0kb downstream 2.0kb downstream 2000 false Chr08: 65710301-65712300 Eucalyptus grandis
Eucgr.H04680 5.0kb upstream 5.0kb upstream 11141 true Chr08: 65699160-65710300 Eucalyptus grandis
Eucgr.H04680 5.0kb upstream 5.0kb upstream 5000 false Chr08: 65699160-65704159 Eucalyptus grandis
Eucgr.H04680 5.0kb downstream 5.0kb downstream 11141 true Chr08: 65704160-65715300 Eucalyptus grandis
Eucgr.H04680 5.0kb downstream 5.0kb downstream 5000 false Chr08: 65710301-65715300 Eucalyptus grandis
Eucgr.H04680 10.0kb upstream 10.0kb upstream 16141 true Chr08: 65694160-65710300 Eucalyptus grandis
Eucgr.H04680 10.0kb upstream 10.0kb upstream 10000 false Chr08: 65694160-65704159 Eucalyptus grandis
Eucgr.H04680 10.0kb downstream 10.0kb downstream 16141 true Chr08: 65704160-65720300 Eucalyptus grandis
Eucgr.H04680 10.0kb downstream 10.0kb downstream 10000 false Chr08: 65710301-65720300 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065822 5270 Rosid View MSA
123746976 5271 Pentapetalae View MSA
122787217 5272 Eudicot View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1457 0.0 25.3461    
cufflinks 22.7749 0.0 52.2123    
cufflinks 15.0722 0.0 37.581    
cufflinks 24.1355 0.0 55.5535    
cufflinks 21.5408 0.0 49.1987    
cufflinks 6.76135 0.0 16.2971   Low

0 Strain