Gene : Eucgr.H04648 E. grandis v2.0
Defline:  (1 of 6) PTHR10509:SF20 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  3662
Name:  ? Eucgr.H04648 Secondary Identifier:  ? PAC:32042458
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5391 Eucalyptus grandis pathologic  
Egrandis PWY-7498 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04648 0.5kb upstream 0.5kb upstream 2931 true Chr08: 65323326-65326256 Eucalyptus grandis
Eucgr.H04648 0.5kb upstream 0.5kb upstream 500 false Chr08: 65325757-65326256 Eucalyptus grandis
Eucgr.H04648 0.5kb downstream 0.5kb downstream 2931 true Chr08: 65322826-65325756 Eucalyptus grandis
Eucgr.H04648 0.5kb downstream 0.5kb downstream 500 false Chr08: 65322826-65323325 Eucalyptus grandis
Eucgr.H04648 1.0kb upstream 1.0kb upstream 3431 true Chr08: 65323326-65326756 Eucalyptus grandis
Eucgr.H04648 1.0kb upstream 1.0kb upstream 1000 false Chr08: 65325757-65326756 Eucalyptus grandis
Eucgr.H04648 1.0kb downstream 1.0kb downstream 3431 true Chr08: 65322326-65325756 Eucalyptus grandis
Eucgr.H04648 1.0kb downstream 1.0kb downstream 1000 false Chr08: 65322326-65323325 Eucalyptus grandis
Eucgr.H04648 2.0kb upstream 2.0kb upstream 4431 true Chr08: 65323326-65327756 Eucalyptus grandis
Eucgr.H04648 2.0kb upstream 2.0kb upstream 2000 false Chr08: 65325757-65327756 Eucalyptus grandis
Eucgr.H04648 2.0kb downstream 2.0kb downstream 4431 true Chr08: 65321326-65325756 Eucalyptus grandis
Eucgr.H04648 2.0kb downstream 2.0kb downstream 2000 false Chr08: 65321326-65323325 Eucalyptus grandis
Eucgr.H04648 5.0kb upstream 5.0kb upstream 7431 true Chr08: 65323326-65330756 Eucalyptus grandis
Eucgr.H04648 5.0kb upstream 5.0kb upstream 5000 false Chr08: 65325757-65330756 Eucalyptus grandis
Eucgr.H04648 5.0kb downstream 5.0kb downstream 7431 true Chr08: 65318326-65325756 Eucalyptus grandis
Eucgr.H04648 5.0kb downstream 5.0kb downstream 5000 false Chr08: 65318326-65323325 Eucalyptus grandis
Eucgr.H04648 10.0kb upstream 10.0kb upstream 12431 true Chr08: 65323326-65335756 Eucalyptus grandis
Eucgr.H04648 10.0kb upstream 10.0kb upstream 10000 false Chr08: 65325757-65335756 Eucalyptus grandis
Eucgr.H04648 10.0kb downstream 10.0kb downstream 12431 true Chr08: 65313326-65325756 Eucalyptus grandis
Eucgr.H04648 10.0kb downstream 10.0kb downstream 10000 false Chr08: 65313326-65323325 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779201 5273 Angiosperm View MSA
124066642 5270 Rosid View MSA
123738230 5271 Pentapetalae View MSA
122769915 5272 Eudicot View MSA
121050882 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.8941 0.0 51.5572    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.328 0.0 46.0842    
cufflinks 0.266676 0.0 1.12975 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.17579 0.0 6.79546    

0 Strain