Gene : Eucgr.H04659 E. grandis v2.0
Defline:  (1 of 2) PTHR11780 - NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1 Genomic Order:  3673
Name:  ? Eucgr.H04659 Secondary Identifier:  ? PAC:32044114
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3781 Eucalyptus grandis pathologic  
Egrandis PWY-4302 Eucalyptus grandis pathologic  
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04659 0.5kb upstream 0.5kb upstream 3729 true Chr08: 65451073-65454801 Eucalyptus grandis
Eucgr.H04659 0.5kb upstream 0.5kb upstream 500 false Chr08: 65454302-65454801 Eucalyptus grandis
Eucgr.H04659 0.5kb downstream 0.5kb downstream 3729 true Chr08: 65450573-65454301 Eucalyptus grandis
Eucgr.H04659 0.5kb downstream 0.5kb downstream 500 false Chr08: 65450573-65451072 Eucalyptus grandis
Eucgr.H04659 1.0kb upstream 1.0kb upstream 4229 true Chr08: 65451073-65455301 Eucalyptus grandis
Eucgr.H04659 1.0kb upstream 1.0kb upstream 1000 false Chr08: 65454302-65455301 Eucalyptus grandis
Eucgr.H04659 1.0kb downstream 1.0kb downstream 4229 true Chr08: 65450073-65454301 Eucalyptus grandis
Eucgr.H04659 1.0kb downstream 1.0kb downstream 1000 false Chr08: 65450073-65451072 Eucalyptus grandis
Eucgr.H04659 2.0kb upstream 2.0kb upstream 5229 true Chr08: 65451073-65456301 Eucalyptus grandis
Eucgr.H04659 2.0kb upstream 2.0kb upstream 2000 false Chr08: 65454302-65456301 Eucalyptus grandis
Eucgr.H04659 2.0kb downstream 2.0kb downstream 5229 true Chr08: 65449073-65454301 Eucalyptus grandis
Eucgr.H04659 2.0kb downstream 2.0kb downstream 2000 false Chr08: 65449073-65451072 Eucalyptus grandis
Eucgr.H04659 5.0kb upstream 5.0kb upstream 8229 true Chr08: 65451073-65459301 Eucalyptus grandis
Eucgr.H04659 5.0kb upstream 5.0kb upstream 5000 false Chr08: 65454302-65459301 Eucalyptus grandis
Eucgr.H04659 5.0kb downstream 5.0kb downstream 8229 true Chr08: 65446073-65454301 Eucalyptus grandis
Eucgr.H04659 5.0kb downstream 5.0kb downstream 5000 false Chr08: 65446073-65451072 Eucalyptus grandis
Eucgr.H04659 10.0kb upstream 10.0kb upstream 13229 true Chr08: 65451073-65464301 Eucalyptus grandis
Eucgr.H04659 10.0kb upstream 10.0kb upstream 10000 false Chr08: 65454302-65464301 Eucalyptus grandis
Eucgr.H04659 10.0kb downstream 10.0kb downstream 13229 true Chr08: 65441073-65454301 Eucalyptus grandis
Eucgr.H04659 10.0kb downstream 10.0kb downstream 10000 false Chr08: 65441073-65451072 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064570 5270 Rosid View MSA
123748716 5271 Pentapetalae View MSA
122786089 5272 Eudicot View MSA
122048540 5273 Angiosperm View MSA
121346586 5274 Embryophyte View MSA
123424028 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.5719 0.0 116.174 High High
cufflinks 47.3744 0.0 106.593 High  
cufflinks 41.6841 0.0 93.2553 High  
cufflinks 51.0751 0.0 115.687 High High
cufflinks 40.4482 0.0 90.3789 High Low
cufflinks 41.1396 0.0 91.7425 High  

0 Strain