Gene : Eucgr.I00205 E. grandis v2.0
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  155
Name:  ? Eucgr.I00205 Secondary Identifier:  ? PAC:32064152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00205 0.5kb upstream 0.5kb upstream 2961 true Chr09: 4299398-4302358 Eucalyptus grandis
Eucgr.I00205 0.5kb upstream 0.5kb upstream 500 false Chr09: 4299398-4299897 Eucalyptus grandis
Eucgr.I00205 0.5kb downstream 0.5kb downstream 2961 true Chr09: 4299898-4302858 Eucalyptus grandis
Eucgr.I00205 0.5kb downstream 0.5kb downstream 500 false Chr09: 4302359-4302858 Eucalyptus grandis
Eucgr.I00205 1.0kb upstream 1.0kb upstream 3461 true Chr09: 4298898-4302358 Eucalyptus grandis
Eucgr.I00205 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4298898-4299897 Eucalyptus grandis
Eucgr.I00205 1.0kb downstream 1.0kb downstream 3461 true Chr09: 4299898-4303358 Eucalyptus grandis
Eucgr.I00205 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4302359-4303358 Eucalyptus grandis
Eucgr.I00205 2.0kb upstream 2.0kb upstream 4461 true Chr09: 4297898-4302358 Eucalyptus grandis
Eucgr.I00205 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4297898-4299897 Eucalyptus grandis
Eucgr.I00205 2.0kb downstream 2.0kb downstream 4461 true Chr09: 4299898-4304358 Eucalyptus grandis
Eucgr.I00205 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4302359-4304358 Eucalyptus grandis
Eucgr.I00205 5.0kb upstream 5.0kb upstream 7461 true Chr09: 4294898-4302358 Eucalyptus grandis
Eucgr.I00205 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4294898-4299897 Eucalyptus grandis
Eucgr.I00205 5.0kb downstream 5.0kb downstream 7461 true Chr09: 4299898-4307358 Eucalyptus grandis
Eucgr.I00205 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4302359-4307358 Eucalyptus grandis
Eucgr.I00205 10.0kb upstream 10.0kb upstream 12461 true Chr09: 4289898-4302358 Eucalyptus grandis
Eucgr.I00205 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4289898-4299897 Eucalyptus grandis
Eucgr.I00205 10.0kb downstream 10.0kb downstream 12461 true Chr09: 4299898-4312358 Eucalyptus grandis
Eucgr.I00205 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4302359-4312358 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061930 5270 Rosid View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.77939 0.0 5.27717    
cufflinks 0.886485 0.0 2.854    
cufflinks 0.29343 0.0 1.09993 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.66084 0.0 12.5263   High

0 Strain