Gene : Eucgr.I00150 E. grandis v2.0
Defline:  (1 of 3) PTHR24031:SF266 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 35-RELATED Genomic Order:  114
Name:  ? Eucgr.I00150 Secondary Identifier:  ? PAC:32063179
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00150 0.5kb upstream 0.5kb upstream 1756 true Chr09: 3326449-3328204 Eucalyptus grandis
Eucgr.I00150 0.5kb upstream 0.5kb upstream 500 false Chr09: 3327705-3328204 Eucalyptus grandis
Eucgr.I00150 0.5kb downstream 0.5kb downstream 1756 true Chr09: 3325949-3327704 Eucalyptus grandis
Eucgr.I00150 0.5kb downstream 0.5kb downstream 500 false Chr09: 3325949-3326448 Eucalyptus grandis
Eucgr.I00150 1.0kb upstream 1.0kb upstream 2256 true Chr09: 3326449-3328704 Eucalyptus grandis
Eucgr.I00150 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3327705-3328704 Eucalyptus grandis
Eucgr.I00150 1.0kb downstream 1.0kb downstream 2256 true Chr09: 3325449-3327704 Eucalyptus grandis
Eucgr.I00150 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3325449-3326448 Eucalyptus grandis
Eucgr.I00150 2.0kb upstream 2.0kb upstream 3256 true Chr09: 3326449-3329704 Eucalyptus grandis
Eucgr.I00150 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3327705-3329704 Eucalyptus grandis
Eucgr.I00150 2.0kb downstream 2.0kb downstream 3256 true Chr09: 3324449-3327704 Eucalyptus grandis
Eucgr.I00150 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3324449-3326448 Eucalyptus grandis
Eucgr.I00150 5.0kb upstream 5.0kb upstream 6256 true Chr09: 3326449-3332704 Eucalyptus grandis
Eucgr.I00150 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3327705-3332704 Eucalyptus grandis
Eucgr.I00150 5.0kb downstream 5.0kb downstream 6256 true Chr09: 3321449-3327704 Eucalyptus grandis
Eucgr.I00150 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3321449-3326448 Eucalyptus grandis
Eucgr.I00150 10.0kb upstream 10.0kb upstream 11256 true Chr09: 3326449-3337704 Eucalyptus grandis
Eucgr.I00150 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3327705-3337704 Eucalyptus grandis
Eucgr.I00150 10.0kb downstream 10.0kb downstream 11256 true Chr09: 3316449-3327704 Eucalyptus grandis
Eucgr.I00150 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3316449-3326448 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074899 5270 Rosid View MSA
123752818 5271 Pentapetalae View MSA
122797459 5272 Eudicot View MSA
122050578 5273 Angiosperm View MSA
123429061 5275 Viridiplantae View MSA
121349468 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.7468 0.0 182.992 High  
cufflinks 29.6004 0.0 67.3818   Low
cufflinks 143.606 0.0 320.801 High High
cufflinks 80.7053 0.0 178.485 High  
cufflinks 139.131 0.0 310.546 High  
cufflinks 50.8554 0.0 113.354 High  

0 Strain