Gene : Eucgr.I00039 E. grandis v2.0
Defline:  (1 of 7) KOG2922 - Uncharacterized conserved protein Genomic Order:  34
Name:  ? Eucgr.I00039 Secondary Identifier:  ? PAC:32063562
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00039 0.5kb upstream 0.5kb upstream 9373 true Chr09: 653534-662906 Eucalyptus grandis
Eucgr.I00039 0.5kb upstream 0.5kb upstream 500 false Chr09: 662407-662906 Eucalyptus grandis
Eucgr.I00039 0.5kb downstream 0.5kb downstream 9373 true Chr09: 653034-662406 Eucalyptus grandis
Eucgr.I00039 0.5kb downstream 0.5kb downstream 500 false Chr09: 653034-653533 Eucalyptus grandis
Eucgr.I00039 1.0kb upstream 1.0kb upstream 9873 true Chr09: 653534-663406 Eucalyptus grandis
Eucgr.I00039 1.0kb upstream 1.0kb upstream 1000 false Chr09: 662407-663406 Eucalyptus grandis
Eucgr.I00039 1.0kb downstream 1.0kb downstream 9873 true Chr09: 652534-662406 Eucalyptus grandis
Eucgr.I00039 1.0kb downstream 1.0kb downstream 1000 false Chr09: 652534-653533 Eucalyptus grandis
Eucgr.I00039 2.0kb upstream 2.0kb upstream 10873 true Chr09: 653534-664406 Eucalyptus grandis
Eucgr.I00039 2.0kb upstream 2.0kb upstream 2000 false Chr09: 662407-664406 Eucalyptus grandis
Eucgr.I00039 2.0kb downstream 2.0kb downstream 10873 true Chr09: 651534-662406 Eucalyptus grandis
Eucgr.I00039 2.0kb downstream 2.0kb downstream 2000 false Chr09: 651534-653533 Eucalyptus grandis
Eucgr.I00039 5.0kb upstream 5.0kb upstream 13873 true Chr09: 653534-667406 Eucalyptus grandis
Eucgr.I00039 5.0kb upstream 5.0kb upstream 5000 false Chr09: 662407-667406 Eucalyptus grandis
Eucgr.I00039 5.0kb downstream 5.0kb downstream 13873 true Chr09: 648534-662406 Eucalyptus grandis
Eucgr.I00039 5.0kb downstream 5.0kb downstream 5000 false Chr09: 648534-653533 Eucalyptus grandis
Eucgr.I00039 10.0kb upstream 10.0kb upstream 18873 true Chr09: 653534-672406 Eucalyptus grandis
Eucgr.I00039 10.0kb upstream 10.0kb upstream 10000 false Chr09: 662407-672406 Eucalyptus grandis
Eucgr.I00039 10.0kb downstream 10.0kb downstream 18873 true Chr09: 643534-662406 Eucalyptus grandis
Eucgr.I00039 10.0kb downstream 10.0kb downstream 10000 false Chr09: 643534-653533 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074808 5270 Rosid View MSA
123742367 5271 Pentapetalae View MSA
122795464 5272 Eudicot View MSA
122048593 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.87408 0.0 20.1676    
cufflinks 12.7732 0.0 32.6261   High
cufflinks 8.19067 0.0 23.3801    
cufflinks 7.08633 0.0 22.4455    
cufflinks 9.28325 0.0 25.5439    
cufflinks 4.94177 0.0 12.4292   Low

0 Strain