Gene : Eucgr.I00032 E. grandis v2.0
Defline:  (1 of 2) KOG4508 - Uncharacterized conserved protein Genomic Order:  29
Name:  ? Eucgr.I00032 Secondary Identifier:  ? PAC:32063843
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00032 0.5kb upstream 0.5kb upstream 6852 true Chr09: 497685-504536 Eucalyptus grandis
Eucgr.I00032 0.5kb upstream 0.5kb upstream 500 false Chr09: 504037-504536 Eucalyptus grandis
Eucgr.I00032 0.5kb downstream 0.5kb downstream 6852 true Chr09: 497185-504036 Eucalyptus grandis
Eucgr.I00032 0.5kb downstream 0.5kb downstream 500 false Chr09: 497185-497684 Eucalyptus grandis
Eucgr.I00032 1.0kb upstream 1.0kb upstream 7352 true Chr09: 497685-505036 Eucalyptus grandis
Eucgr.I00032 1.0kb upstream 1.0kb upstream 1000 false Chr09: 504037-505036 Eucalyptus grandis
Eucgr.I00032 1.0kb downstream 1.0kb downstream 7352 true Chr09: 496685-504036 Eucalyptus grandis
Eucgr.I00032 1.0kb downstream 1.0kb downstream 1000 false Chr09: 496685-497684 Eucalyptus grandis
Eucgr.I00032 2.0kb upstream 2.0kb upstream 8352 true Chr09: 497685-506036 Eucalyptus grandis
Eucgr.I00032 2.0kb upstream 2.0kb upstream 2000 false Chr09: 504037-506036 Eucalyptus grandis
Eucgr.I00032 2.0kb downstream 2.0kb downstream 8352 true Chr09: 495685-504036 Eucalyptus grandis
Eucgr.I00032 2.0kb downstream 2.0kb downstream 2000 false Chr09: 495685-497684 Eucalyptus grandis
Eucgr.I00032 5.0kb upstream 5.0kb upstream 11352 true Chr09: 497685-509036 Eucalyptus grandis
Eucgr.I00032 5.0kb upstream 5.0kb upstream 5000 false Chr09: 504037-509036 Eucalyptus grandis
Eucgr.I00032 5.0kb downstream 5.0kb downstream 11352 true Chr09: 492685-504036 Eucalyptus grandis
Eucgr.I00032 5.0kb downstream 5.0kb downstream 5000 false Chr09: 492685-497684 Eucalyptus grandis
Eucgr.I00032 10.0kb upstream 10.0kb upstream 16352 true Chr09: 497685-514036 Eucalyptus grandis
Eucgr.I00032 10.0kb upstream 10.0kb upstream 10000 false Chr09: 504037-514036 Eucalyptus grandis
Eucgr.I00032 10.0kb downstream 10.0kb downstream 16352 true Chr09: 487685-504036 Eucalyptus grandis
Eucgr.I00032 10.0kb downstream 10.0kb downstream 10000 false Chr09: 487685-497684 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068392 5270 Rosid View MSA
123738240 5271 Pentapetalae View MSA
122786262 5272 Eudicot View MSA
122047159 5273 Angiosperm View MSA
121348549 5274 Embryophyte View MSA
123425506 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5267 0.0 28.578    
cufflinks 24.8847 0.0 55.1113   High
cufflinks 12.2437 0.0 27.8998    
cufflinks 25.153 0.0 55.6903   High
cufflinks 13.8153 0.0 31.2387    
cufflinks 9.72902 0.0 22.7082   Low

0 Strain