Gene : Eucgr.I00015 E. grandis v2.0
Defline:  (1 of 1) PTHR21660:SF6 - F19P19.27 PROTEIN Genomic Order:  13
Name:  ? Eucgr.I00015 Secondary Identifier:  ? PAC:32063814
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY-321 Eucalyptus grandis pathologic  
Egrandis PWY-5148 Eucalyptus grandis pathologic  
Egrandis PWY-6733 Eucalyptus grandis pathologic  
Egrandis PWY-735 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00015 0.5kb upstream 0.5kb upstream 2705 true Chr09: 219501-222205 Eucalyptus grandis
Eucgr.I00015 0.5kb upstream 0.5kb upstream 500 false Chr09: 221706-222205 Eucalyptus grandis
Eucgr.I00015 0.5kb downstream 0.5kb downstream 2705 true Chr09: 219001-221705 Eucalyptus grandis
Eucgr.I00015 0.5kb downstream 0.5kb downstream 500 false Chr09: 219001-219500 Eucalyptus grandis
Eucgr.I00015 1.0kb upstream 1.0kb upstream 3205 true Chr09: 219501-222705 Eucalyptus grandis
Eucgr.I00015 1.0kb upstream 1.0kb upstream 1000 false Chr09: 221706-222705 Eucalyptus grandis
Eucgr.I00015 1.0kb downstream 1.0kb downstream 3205 true Chr09: 218501-221705 Eucalyptus grandis
Eucgr.I00015 1.0kb downstream 1.0kb downstream 1000 false Chr09: 218501-219500 Eucalyptus grandis
Eucgr.I00015 2.0kb upstream 2.0kb upstream 4205 true Chr09: 219501-223705 Eucalyptus grandis
Eucgr.I00015 2.0kb upstream 2.0kb upstream 2000 false Chr09: 221706-223705 Eucalyptus grandis
Eucgr.I00015 2.0kb downstream 2.0kb downstream 4205 true Chr09: 217501-221705 Eucalyptus grandis
Eucgr.I00015 2.0kb downstream 2.0kb downstream 2000 false Chr09: 217501-219500 Eucalyptus grandis
Eucgr.I00015 5.0kb upstream 5.0kb upstream 7205 true Chr09: 219501-226705 Eucalyptus grandis
Eucgr.I00015 5.0kb upstream 5.0kb upstream 5000 false Chr09: 221706-226705 Eucalyptus grandis
Eucgr.I00015 5.0kb downstream 5.0kb downstream 7205 true Chr09: 214501-221705 Eucalyptus grandis
Eucgr.I00015 5.0kb downstream 5.0kb downstream 5000 false Chr09: 214501-219500 Eucalyptus grandis
Eucgr.I00015 10.0kb upstream 10.0kb upstream 12205 true Chr09: 219501-231705 Eucalyptus grandis
Eucgr.I00015 10.0kb upstream 10.0kb upstream 10000 false Chr09: 221706-231705 Eucalyptus grandis
Eucgr.I00015 10.0kb downstream 10.0kb downstream 12205 true Chr09: 209501-221705 Eucalyptus grandis
Eucgr.I00015 10.0kb downstream 10.0kb downstream 10000 false Chr09: 209501-219500 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063783 5270 Rosid View MSA
123750481 5271 Pentapetalae View MSA
122787184 5272 Eudicot View MSA
122043705 5273 Angiosperm View MSA
121345326 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6413 0.0 46.5582    
cufflinks 16.4874 0.0 39.7568   Low
cufflinks 19.1798 0.0 45.7814    
cufflinks 21.4241 0.0 50.5755    
cufflinks 25.7342 0.0 59.6599   High
cufflinks 24.8923 0.0 57.7319   High

0 Strain