Gene : Eucgr.I00008 E. grandis v2.0
Defline:  (1 of 1) PF10537 - ATP-utilising chromatin assembly and remodelling N-terminal (WAC_Acf1_DNA_bd) Genomic Order:  6
Name:  ? Eucgr.I00008 Secondary Identifier:  ? PAC:32065305
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00008 0.5kb upstream 0.5kb upstream 8109 true Chr09: 162485-170593 Eucalyptus grandis
Eucgr.I00008 0.5kb upstream 0.5kb upstream 500 false Chr09: 162485-162984 Eucalyptus grandis
Eucgr.I00008 0.5kb downstream 0.5kb downstream 8109 true Chr09: 162985-171093 Eucalyptus grandis
Eucgr.I00008 0.5kb downstream 0.5kb downstream 500 false Chr09: 170594-171093 Eucalyptus grandis
Eucgr.I00008 1.0kb upstream 1.0kb upstream 8609 true Chr09: 161985-170593 Eucalyptus grandis
Eucgr.I00008 1.0kb upstream 1.0kb upstream 1000 false Chr09: 161985-162984 Eucalyptus grandis
Eucgr.I00008 1.0kb downstream 1.0kb downstream 8609 true Chr09: 162985-171593 Eucalyptus grandis
Eucgr.I00008 1.0kb downstream 1.0kb downstream 1000 false Chr09: 170594-171593 Eucalyptus grandis
Eucgr.I00008 2.0kb upstream 2.0kb upstream 9609 true Chr09: 160985-170593 Eucalyptus grandis
Eucgr.I00008 2.0kb upstream 2.0kb upstream 2000 false Chr09: 160985-162984 Eucalyptus grandis
Eucgr.I00008 2.0kb downstream 2.0kb downstream 9609 true Chr09: 162985-172593 Eucalyptus grandis
Eucgr.I00008 2.0kb downstream 2.0kb downstream 2000 false Chr09: 170594-172593 Eucalyptus grandis
Eucgr.I00008 5.0kb upstream 5.0kb upstream 12609 true Chr09: 157985-170593 Eucalyptus grandis
Eucgr.I00008 5.0kb upstream 5.0kb upstream 5000 false Chr09: 157985-162984 Eucalyptus grandis
Eucgr.I00008 5.0kb downstream 5.0kb downstream 12609 true Chr09: 162985-175593 Eucalyptus grandis
Eucgr.I00008 5.0kb downstream 5.0kb downstream 5000 false Chr09: 170594-175593 Eucalyptus grandis
Eucgr.I00008 10.0kb upstream 10.0kb upstream 17609 true Chr09: 152985-170593 Eucalyptus grandis
Eucgr.I00008 10.0kb upstream 10.0kb upstream 10000 false Chr09: 152985-162984 Eucalyptus grandis
Eucgr.I00008 10.0kb downstream 10.0kb downstream 17609 true Chr09: 162985-180593 Eucalyptus grandis
Eucgr.I00008 10.0kb downstream 10.0kb downstream 10000 false Chr09: 170594-180593 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067702 5270 Rosid View MSA
123739620 5271 Pentapetalae View MSA
122786030 5272 Eudicot View MSA
122050407 5273 Angiosperm View MSA
121345343 5274 Embryophyte View MSA
123380199 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.15463 0.0 18.2875    
cufflinks 4.89153 0.0 11.2786    
cufflinks 8.94031 0.0 19.9359    
cufflinks 7.16231 0.0 16.0862    
cufflinks 2.15228 0.0 5.35528   Low
cufflinks 9.30754 0.0 20.8154    

0 Strain