Gene : Eucgr.L00633 E. grandis v2.0
Defline:  (1 of 1) PTHR33926:SF1 - PROTEIN TIC 22-LIKE, CHLOROPLASTIC Genomic Order:  225
Name:  ? Eucgr.L00633 Secondary Identifier:  ? PAC:32043927
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00633 0.5kb upstream 0.5kb upstream 3745 true Chr08: 3549196-3552940 Eucalyptus grandis
Eucgr.L00633 0.5kb upstream 0.5kb upstream 500 false Chr08: 3549196-3549695 Eucalyptus grandis
Eucgr.L00633 0.5kb downstream 0.5kb downstream 3745 true Chr08: 3549696-3553440 Eucalyptus grandis
Eucgr.L00633 0.5kb downstream 0.5kb downstream 500 false Chr08: 3552941-3553440 Eucalyptus grandis
Eucgr.L00633 1.0kb upstream 1.0kb upstream 4245 true Chr08: 3548696-3552940 Eucalyptus grandis
Eucgr.L00633 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3548696-3549695 Eucalyptus grandis
Eucgr.L00633 1.0kb downstream 1.0kb downstream 4245 true Chr08: 3549696-3553940 Eucalyptus grandis
Eucgr.L00633 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3552941-3553940 Eucalyptus grandis
Eucgr.L00633 2.0kb upstream 2.0kb upstream 5245 true Chr08: 3547696-3552940 Eucalyptus grandis
Eucgr.L00633 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3547696-3549695 Eucalyptus grandis
Eucgr.L00633 2.0kb downstream 2.0kb downstream 5245 true Chr08: 3549696-3554940 Eucalyptus grandis
Eucgr.L00633 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3552941-3554940 Eucalyptus grandis
Eucgr.L00633 5.0kb upstream 5.0kb upstream 8245 true Chr08: 3544696-3552940 Eucalyptus grandis
Eucgr.L00633 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3544696-3549695 Eucalyptus grandis
Eucgr.L00633 5.0kb downstream 5.0kb downstream 8245 true Chr08: 3549696-3557940 Eucalyptus grandis
Eucgr.L00633 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3552941-3557940 Eucalyptus grandis
Eucgr.L00633 10.0kb upstream 10.0kb upstream 13245 true Chr08: 3539696-3552940 Eucalyptus grandis
Eucgr.L00633 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3539696-3549695 Eucalyptus grandis
Eucgr.L00633 10.0kb downstream 10.0kb downstream 13245 true Chr08: 3549696-3562940 Eucalyptus grandis
Eucgr.L00633 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3552941-3562940 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069208 5270 Rosid View MSA
123743684 5271 Pentapetalae View MSA
122792985 5272 Eudicot View MSA
122046686 5273 Angiosperm View MSA
121348613 5274 Embryophyte View MSA
123424659 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8735 0.0 44.9472    
cufflinks 3.30312 0.0 9.3611   Low
cufflinks 13.5796 0.0 31.8206    
cufflinks 13.8863 0.0 32.4744    
cufflinks 11.0783 0.0 26.4845    
cufflinks 11.7048 0.0 27.6055    

0 Strain