Gene : Eucgr.J01293 E. grandis v2.0
Defline:  (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6 Genomic Order:  3945
Name:  ? Eucgr.J01293 Secondary Identifier:  ? PAC:32043572
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01293 0.5kb upstream 0.5kb upstream 5763 true Chr08: 69611620-69617382 Eucalyptus grandis
Eucgr.J01293 0.5kb upstream 0.5kb upstream 500 false Chr08: 69616883-69617382 Eucalyptus grandis
Eucgr.J01293 0.5kb downstream 0.5kb downstream 5763 true Chr08: 69611120-69616882 Eucalyptus grandis
Eucgr.J01293 0.5kb downstream 0.5kb downstream 500 false Chr08: 69611120-69611619 Eucalyptus grandis
Eucgr.J01293 1.0kb upstream 1.0kb upstream 6263 true Chr08: 69611620-69617882 Eucalyptus grandis
Eucgr.J01293 1.0kb upstream 1.0kb upstream 1000 false Chr08: 69616883-69617882 Eucalyptus grandis
Eucgr.J01293 1.0kb downstream 1.0kb downstream 6263 true Chr08: 69610620-69616882 Eucalyptus grandis
Eucgr.J01293 1.0kb downstream 1.0kb downstream 1000 false Chr08: 69610620-69611619 Eucalyptus grandis
Eucgr.J01293 2.0kb upstream 2.0kb upstream 7263 true Chr08: 69611620-69618882 Eucalyptus grandis
Eucgr.J01293 2.0kb upstream 2.0kb upstream 2000 false Chr08: 69616883-69618882 Eucalyptus grandis
Eucgr.J01293 2.0kb downstream 2.0kb downstream 7263 true Chr08: 69609620-69616882 Eucalyptus grandis
Eucgr.J01293 2.0kb downstream 2.0kb downstream 2000 false Chr08: 69609620-69611619 Eucalyptus grandis
Eucgr.J01293 5.0kb upstream 5.0kb upstream 10263 true Chr08: 69611620-69621882 Eucalyptus grandis
Eucgr.J01293 5.0kb upstream 5.0kb upstream 5000 false Chr08: 69616883-69621882 Eucalyptus grandis
Eucgr.J01293 5.0kb downstream 5.0kb downstream 10263 true Chr08: 69606620-69616882 Eucalyptus grandis
Eucgr.J01293 5.0kb downstream 5.0kb downstream 5000 false Chr08: 69606620-69611619 Eucalyptus grandis
Eucgr.J01293 10.0kb upstream 10.0kb upstream 15263 true Chr08: 69611620-69626882 Eucalyptus grandis
Eucgr.J01293 10.0kb upstream 10.0kb upstream 10000 false Chr08: 69616883-69626882 Eucalyptus grandis
Eucgr.J01293 10.0kb downstream 10.0kb downstream 15263 true Chr08: 69601620-69616882 Eucalyptus grandis
Eucgr.J01293 10.0kb downstream 10.0kb downstream 10000 false Chr08: 69601620-69611619 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061432 5270 Rosid View MSA
123739619 5271 Pentapetalae View MSA
122787508 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.96715 0.0 14.2555    
cufflinks 2.07969 0.0 5.50588    
cufflinks 3.70525 0.0 9.5047    
cufflinks 2.14698 0.0 6.01266    
cufflinks 1.89574 0.0 5.35404    
cufflinks 21.6605 0.0 49.0217   High

0 Strain