Gene : Eucgr.H05132 E. grandis v2.0
Defline:  (1 of 1) KOG1138 - Predicted cleavage and polyadenylation specificity factor (CPSF subunit) Genomic Order:  4001
Name:  ? Eucgr.H05132 Secondary Identifier:  ? PAC:32043223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H05132 0.5kb upstream 0.5kb upstream 5274 true Chr08: 70748359-70753632 Eucalyptus grandis
Eucgr.H05132 0.5kb upstream 0.5kb upstream 500 false Chr08: 70753133-70753632 Eucalyptus grandis
Eucgr.H05132 0.5kb downstream 0.5kb downstream 5274 true Chr08: 70747859-70753132 Eucalyptus grandis
Eucgr.H05132 0.5kb downstream 0.5kb downstream 500 false Chr08: 70747859-70748358 Eucalyptus grandis
Eucgr.H05132 1.0kb upstream 1.0kb upstream 5774 true Chr08: 70748359-70754132 Eucalyptus grandis
Eucgr.H05132 1.0kb upstream 1.0kb upstream 1000 false Chr08: 70753133-70754132 Eucalyptus grandis
Eucgr.H05132 1.0kb downstream 1.0kb downstream 5774 true Chr08: 70747359-70753132 Eucalyptus grandis
Eucgr.H05132 1.0kb downstream 1.0kb downstream 1000 false Chr08: 70747359-70748358 Eucalyptus grandis
Eucgr.H05132 2.0kb upstream 2.0kb upstream 6774 true Chr08: 70748359-70755132 Eucalyptus grandis
Eucgr.H05132 2.0kb upstream 2.0kb upstream 2000 false Chr08: 70753133-70755132 Eucalyptus grandis
Eucgr.H05132 2.0kb downstream 2.0kb downstream 6774 true Chr08: 70746359-70753132 Eucalyptus grandis
Eucgr.H05132 2.0kb downstream 2.0kb downstream 2000 false Chr08: 70746359-70748358 Eucalyptus grandis
Eucgr.H05132 5.0kb upstream 5.0kb upstream 9774 true Chr08: 70748359-70758132 Eucalyptus grandis
Eucgr.H05132 5.0kb upstream 5.0kb upstream 5000 false Chr08: 70753133-70758132 Eucalyptus grandis
Eucgr.H05132 5.0kb downstream 5.0kb downstream 9774 true Chr08: 70743359-70753132 Eucalyptus grandis
Eucgr.H05132 5.0kb downstream 5.0kb downstream 5000 false Chr08: 70743359-70748358 Eucalyptus grandis
Eucgr.H05132 10.0kb upstream 10.0kb upstream 14774 true Chr08: 70748359-70763132 Eucalyptus grandis
Eucgr.H05132 10.0kb upstream 10.0kb upstream 10000 false Chr08: 70753133-70763132 Eucalyptus grandis
Eucgr.H05132 10.0kb downstream 10.0kb downstream 14774 true Chr08: 70738359-70753132 Eucalyptus grandis
Eucgr.H05132 10.0kb downstream 10.0kb downstream 10000 false Chr08: 70738359-70748358 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068751 5270 Rosid View MSA
123737270 5271 Pentapetalae View MSA
122787689 5272 Eudicot View MSA
122041612 5273 Angiosperm View MSA
121343816 5274 Embryophyte View MSA
123379922 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43618 0.0 4.07572    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.301099 0.0 1.02845 Low  
cufflinks 0.276206 0.0 0.948421 Low  
cufflinks 1.92067 0.0 5.26695   High
cufflinks 0.524296 0.0 1.68617 Low  

0 Strain