Gene : Eucgr.H05148 E. grandis v2.0
Defline:  (1 of 3) PTHR10799//PTHR10799:SF654 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  3987
Name:  ? Eucgr.H05148 Secondary Identifier:  ? PAC:32044979
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H05148 0.5kb upstream 0.5kb upstream 13088 true Chr08: 70538261-70551348 Eucalyptus grandis
Eucgr.H05148 0.5kb upstream 0.5kb upstream 500 false Chr08: 70538261-70538760 Eucalyptus grandis
Eucgr.H05148 0.5kb downstream 0.5kb downstream 13088 true Chr08: 70538761-70551848 Eucalyptus grandis
Eucgr.H05148 0.5kb downstream 0.5kb downstream 500 false Chr08: 70551349-70551848 Eucalyptus grandis
Eucgr.H05148 1.0kb upstream 1.0kb upstream 13588 true Chr08: 70537761-70551348 Eucalyptus grandis
Eucgr.H05148 1.0kb upstream 1.0kb upstream 1000 false Chr08: 70537761-70538760 Eucalyptus grandis
Eucgr.H05148 1.0kb downstream 1.0kb downstream 13588 true Chr08: 70538761-70552348 Eucalyptus grandis
Eucgr.H05148 1.0kb downstream 1.0kb downstream 1000 false Chr08: 70551349-70552348 Eucalyptus grandis
Eucgr.H05148 2.0kb upstream 2.0kb upstream 14588 true Chr08: 70536761-70551348 Eucalyptus grandis
Eucgr.H05148 2.0kb upstream 2.0kb upstream 2000 false Chr08: 70536761-70538760 Eucalyptus grandis
Eucgr.H05148 2.0kb downstream 2.0kb downstream 14588 true Chr08: 70538761-70553348 Eucalyptus grandis
Eucgr.H05148 2.0kb downstream 2.0kb downstream 2000 false Chr08: 70551349-70553348 Eucalyptus grandis
Eucgr.H05148 5.0kb upstream 5.0kb upstream 17588 true Chr08: 70533761-70551348 Eucalyptus grandis
Eucgr.H05148 5.0kb upstream 5.0kb upstream 5000 false Chr08: 70533761-70538760 Eucalyptus grandis
Eucgr.H05148 5.0kb downstream 5.0kb downstream 17588 true Chr08: 70538761-70556348 Eucalyptus grandis
Eucgr.H05148 5.0kb downstream 5.0kb downstream 5000 false Chr08: 70551349-70556348 Eucalyptus grandis
Eucgr.H05148 10.0kb upstream 10.0kb upstream 22588 true Chr08: 70528761-70551348 Eucalyptus grandis
Eucgr.H05148 10.0kb upstream 10.0kb upstream 10000 false Chr08: 70528761-70538760 Eucalyptus grandis
Eucgr.H05148 10.0kb downstream 10.0kb downstream 22588 true Chr08: 70538761-70561348 Eucalyptus grandis
Eucgr.H05148 10.0kb downstream 10.0kb downstream 10000 false Chr08: 70551349-70561348 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065294 5270 Rosid View MSA
123741298 5271 Pentapetalae View MSA
122791024 5272 Eudicot View MSA
122047710 5273 Angiosperm View MSA
121346299 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.20002 0.0 13.9807   High
cufflinks 1.65932 0.0 4.1679    
cufflinks 2.90205 0.0 6.90495    
cufflinks 0.94905 0.0 2.5134   Low
cufflinks 3.11307 0.0 7.36306    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain