Gene : Eucgr.I00703 E. grandis v2.0
Defline:  (1 of 2) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  557
Name:  ? Eucgr.I00703 Secondary Identifier:  ? PAC:32063398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00703 0.5kb upstream 0.5kb upstream 5607 true Chr09: 14514513-14520119 Eucalyptus grandis
Eucgr.I00703 0.5kb upstream 0.5kb upstream 500 false Chr09: 14514513-14515012 Eucalyptus grandis
Eucgr.I00703 0.5kb downstream 0.5kb downstream 5607 true Chr09: 14515013-14520619 Eucalyptus grandis
Eucgr.I00703 0.5kb downstream 0.5kb downstream 500 false Chr09: 14520120-14520619 Eucalyptus grandis
Eucgr.I00703 1.0kb upstream 1.0kb upstream 6107 true Chr09: 14514013-14520119 Eucalyptus grandis
Eucgr.I00703 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14514013-14515012 Eucalyptus grandis
Eucgr.I00703 1.0kb downstream 1.0kb downstream 6107 true Chr09: 14515013-14521119 Eucalyptus grandis
Eucgr.I00703 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14520120-14521119 Eucalyptus grandis
Eucgr.I00703 2.0kb upstream 2.0kb upstream 7107 true Chr09: 14513013-14520119 Eucalyptus grandis
Eucgr.I00703 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14513013-14515012 Eucalyptus grandis
Eucgr.I00703 2.0kb downstream 2.0kb downstream 7107 true Chr09: 14515013-14522119 Eucalyptus grandis
Eucgr.I00703 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14520120-14522119 Eucalyptus grandis
Eucgr.I00703 5.0kb upstream 5.0kb upstream 10107 true Chr09: 14510013-14520119 Eucalyptus grandis
Eucgr.I00703 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14510013-14515012 Eucalyptus grandis
Eucgr.I00703 5.0kb downstream 5.0kb downstream 10107 true Chr09: 14515013-14525119 Eucalyptus grandis
Eucgr.I00703 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14520120-14525119 Eucalyptus grandis
Eucgr.I00703 10.0kb upstream 10.0kb upstream 15107 true Chr09: 14505013-14520119 Eucalyptus grandis
Eucgr.I00703 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14505013-14515012 Eucalyptus grandis
Eucgr.I00703 10.0kb downstream 10.0kb downstream 15107 true Chr09: 14515013-14530119 Eucalyptus grandis
Eucgr.I00703 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14520120-14530119 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.66858 0.0 9.13818   Low
cufflinks 14.337 0.0 32.2003   High
cufflinks 4.32305 0.0 10.3516    
cufflinks 16.6401 0.0 41.2787   High
cufflinks 6.82058 0.0 19.3461    
cufflinks 5.25863 0.0 12.528    

0 Strain