Gene : Eucgr.I00715 E. grandis v2.0
Defline:  (1 of 16) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  569
Name:  ? Eucgr.I00715 Secondary Identifier:  ? PAC:32063697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00715 0.5kb upstream 0.5kb upstream 4122 true Chr09: 14803425-14807546 Eucalyptus grandis
Eucgr.I00715 0.5kb upstream 0.5kb upstream 500 false Chr09: 14803425-14803924 Eucalyptus grandis
Eucgr.I00715 0.5kb downstream 0.5kb downstream 4122 true Chr09: 14803925-14808046 Eucalyptus grandis
Eucgr.I00715 0.5kb downstream 0.5kb downstream 500 false Chr09: 14807547-14808046 Eucalyptus grandis
Eucgr.I00715 1.0kb upstream 1.0kb upstream 4622 true Chr09: 14802925-14807546 Eucalyptus grandis
Eucgr.I00715 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14802925-14803924 Eucalyptus grandis
Eucgr.I00715 1.0kb downstream 1.0kb downstream 4622 true Chr09: 14803925-14808546 Eucalyptus grandis
Eucgr.I00715 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14807547-14808546 Eucalyptus grandis
Eucgr.I00715 2.0kb upstream 2.0kb upstream 5622 true Chr09: 14801925-14807546 Eucalyptus grandis
Eucgr.I00715 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14801925-14803924 Eucalyptus grandis
Eucgr.I00715 2.0kb downstream 2.0kb downstream 5622 true Chr09: 14803925-14809546 Eucalyptus grandis
Eucgr.I00715 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14807547-14809546 Eucalyptus grandis
Eucgr.I00715 5.0kb upstream 5.0kb upstream 8622 true Chr09: 14798925-14807546 Eucalyptus grandis
Eucgr.I00715 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14798925-14803924 Eucalyptus grandis
Eucgr.I00715 5.0kb downstream 5.0kb downstream 8622 true Chr09: 14803925-14812546 Eucalyptus grandis
Eucgr.I00715 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14807547-14812546 Eucalyptus grandis
Eucgr.I00715 10.0kb upstream 10.0kb upstream 13622 true Chr09: 14793925-14807546 Eucalyptus grandis
Eucgr.I00715 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14793925-14803924 Eucalyptus grandis
Eucgr.I00715 10.0kb downstream 10.0kb downstream 13622 true Chr09: 14803925-14817546 Eucalyptus grandis
Eucgr.I00715 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14807547-14817546 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060971 5270 Rosid View MSA
123750839 5271 Pentapetalae View MSA
122787854 5272 Eudicot View MSA
122046367 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.374 0.0 21.2152    
cufflinks 0.271933 0.0 0.875478 Low  
cufflinks 18.5748 0.0 41.0992    
cufflinks 0.329324 0.0 1.03196 Low  
cufflinks 0.380646 0.0 1.17736 Low  
cufflinks 21.5615 0.0 47.6877   High

0 Strain