Gene : Eucgr.I00693 E. grandis v2.0
Defline:  (1 of 1) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  548
Name:  ? Eucgr.I00693 Secondary Identifier:  ? PAC:32062620
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5936 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00693 0.5kb upstream 0.5kb upstream 2415 true Chr09: 14382492-14384906 Eucalyptus grandis
Eucgr.I00693 0.5kb upstream 0.5kb upstream 500 false Chr09: 14384407-14384906 Eucalyptus grandis
Eucgr.I00693 0.5kb downstream 0.5kb downstream 2415 true Chr09: 14381992-14384406 Eucalyptus grandis
Eucgr.I00693 0.5kb downstream 0.5kb downstream 500 false Chr09: 14381992-14382491 Eucalyptus grandis
Eucgr.I00693 1.0kb upstream 1.0kb upstream 2915 true Chr09: 14382492-14385406 Eucalyptus grandis
Eucgr.I00693 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14384407-14385406 Eucalyptus grandis
Eucgr.I00693 1.0kb downstream 1.0kb downstream 2915 true Chr09: 14381492-14384406 Eucalyptus grandis
Eucgr.I00693 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14381492-14382491 Eucalyptus grandis
Eucgr.I00693 2.0kb upstream 2.0kb upstream 3915 true Chr09: 14382492-14386406 Eucalyptus grandis
Eucgr.I00693 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14384407-14386406 Eucalyptus grandis
Eucgr.I00693 2.0kb downstream 2.0kb downstream 3915 true Chr09: 14380492-14384406 Eucalyptus grandis
Eucgr.I00693 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14380492-14382491 Eucalyptus grandis
Eucgr.I00693 5.0kb upstream 5.0kb upstream 6915 true Chr09: 14382492-14389406 Eucalyptus grandis
Eucgr.I00693 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14384407-14389406 Eucalyptus grandis
Eucgr.I00693 5.0kb downstream 5.0kb downstream 6915 true Chr09: 14377492-14384406 Eucalyptus grandis
Eucgr.I00693 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14377492-14382491 Eucalyptus grandis
Eucgr.I00693 10.0kb upstream 10.0kb upstream 11915 true Chr09: 14382492-14394406 Eucalyptus grandis
Eucgr.I00693 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14384407-14394406 Eucalyptus grandis
Eucgr.I00693 10.0kb downstream 10.0kb downstream 11915 true Chr09: 14372492-14384406 Eucalyptus grandis
Eucgr.I00693 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14372492-14382491 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8739 0.0 55.1335   High
cufflinks 0.94641 0.0 2.80067   Low
cufflinks 17.4556 0.0 39.3246    
cufflinks 0.789157 0.0 2.40646   Low
cufflinks 6.66163 0.0 16.1282    
cufflinks 7.86209 0.0 18.3709    

0 Strain