Gene : Eucgr.I00627 E. grandis v2.0
Defline:  (1 of 3) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  503
Name:  ? Eucgr.I00627 Secondary Identifier:  ? PAC:32062760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00627 0.5kb upstream 0.5kb upstream 3985 true Chr09: 13107003-13110987 Eucalyptus grandis
Eucgr.I00627 0.5kb upstream 0.5kb upstream 500 false Chr09: 13110488-13110987 Eucalyptus grandis
Eucgr.I00627 0.5kb downstream 0.5kb downstream 3985 true Chr09: 13106503-13110487 Eucalyptus grandis
Eucgr.I00627 0.5kb downstream 0.5kb downstream 500 false Chr09: 13106503-13107002 Eucalyptus grandis
Eucgr.I00627 1.0kb upstream 1.0kb upstream 4485 true Chr09: 13107003-13111487 Eucalyptus grandis
Eucgr.I00627 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13110488-13111487 Eucalyptus grandis
Eucgr.I00627 1.0kb downstream 1.0kb downstream 4485 true Chr09: 13106003-13110487 Eucalyptus grandis
Eucgr.I00627 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13106003-13107002 Eucalyptus grandis
Eucgr.I00627 2.0kb upstream 2.0kb upstream 5485 true Chr09: 13107003-13112487 Eucalyptus grandis
Eucgr.I00627 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13110488-13112487 Eucalyptus grandis
Eucgr.I00627 2.0kb downstream 2.0kb downstream 5485 true Chr09: 13105003-13110487 Eucalyptus grandis
Eucgr.I00627 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13105003-13107002 Eucalyptus grandis
Eucgr.I00627 5.0kb upstream 5.0kb upstream 8485 true Chr09: 13107003-13115487 Eucalyptus grandis
Eucgr.I00627 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13110488-13115487 Eucalyptus grandis
Eucgr.I00627 5.0kb downstream 5.0kb downstream 8485 true Chr09: 13102003-13110487 Eucalyptus grandis
Eucgr.I00627 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13102003-13107002 Eucalyptus grandis
Eucgr.I00627 10.0kb upstream 10.0kb upstream 13485 true Chr09: 13107003-13120487 Eucalyptus grandis
Eucgr.I00627 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13110488-13120487 Eucalyptus grandis
Eucgr.I00627 10.0kb downstream 10.0kb downstream 13485 true Chr09: 13097003-13110487 Eucalyptus grandis
Eucgr.I00627 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13097003-13107002 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072489 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.860931 0.0 2.89765    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.52089 0.0 1.981   Low
cufflinks 0.799783 0.0 2.71856    
cufflinks 0.836482 0.0 2.87379    
cufflinks 0.521648 0.0 2.03141 Low Low

0 Strain