Gene : Eucgr.I00597 E. grandis v2.0
Defline:  (1 of 3) PTHR11804:SF49 - ORGANELLAR OLIGOPEPTIDASE A, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Genomic Order:  474
Name:  ? Eucgr.I00597 Secondary Identifier:  ? PAC:32063234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00597 0.5kb upstream 0.5kb upstream 10122 true Chr09: 12136253-12146374 Eucalyptus grandis
Eucgr.I00597 0.5kb upstream 0.5kb upstream 500 false Chr09: 12136253-12136752 Eucalyptus grandis
Eucgr.I00597 0.5kb downstream 0.5kb downstream 10122 true Chr09: 12136753-12146874 Eucalyptus grandis
Eucgr.I00597 0.5kb downstream 0.5kb downstream 500 false Chr09: 12146375-12146874 Eucalyptus grandis
Eucgr.I00597 1.0kb upstream 1.0kb upstream 10622 true Chr09: 12135753-12146374 Eucalyptus grandis
Eucgr.I00597 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12135753-12136752 Eucalyptus grandis
Eucgr.I00597 1.0kb downstream 1.0kb downstream 10622 true Chr09: 12136753-12147374 Eucalyptus grandis
Eucgr.I00597 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12146375-12147374 Eucalyptus grandis
Eucgr.I00597 2.0kb upstream 2.0kb upstream 11622 true Chr09: 12134753-12146374 Eucalyptus grandis
Eucgr.I00597 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12134753-12136752 Eucalyptus grandis
Eucgr.I00597 2.0kb downstream 2.0kb downstream 11622 true Chr09: 12136753-12148374 Eucalyptus grandis
Eucgr.I00597 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12146375-12148374 Eucalyptus grandis
Eucgr.I00597 5.0kb upstream 5.0kb upstream 14622 true Chr09: 12131753-12146374 Eucalyptus grandis
Eucgr.I00597 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12131753-12136752 Eucalyptus grandis
Eucgr.I00597 5.0kb downstream 5.0kb downstream 14622 true Chr09: 12136753-12151374 Eucalyptus grandis
Eucgr.I00597 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12146375-12151374 Eucalyptus grandis
Eucgr.I00597 10.0kb upstream 10.0kb upstream 19622 true Chr09: 12126753-12146374 Eucalyptus grandis
Eucgr.I00597 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12126753-12136752 Eucalyptus grandis
Eucgr.I00597 10.0kb downstream 10.0kb downstream 19622 true Chr09: 12136753-12156374 Eucalyptus grandis
Eucgr.I00597 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12146375-12156374 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074910 5270 Rosid View MSA
123737764 5271 Pentapetalae View MSA
122786245 5272 Eudicot View MSA
122050294 5273 Angiosperm View MSA
121346045 5274 Embryophyte View MSA
123424293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0906841 0.0 0.338614 Low  
cufflinks 0.00981812 0.0 0.081055 Low  
cufflinks 0.167771 0.0 0.57279 Low  
cufflinks 2.58211E-4 0.0 0.0115974 Low Low
cufflinks 0.00278846 0.0 0.0410402 Low  
cufflinks 0.59666 0.0 1.75801 Low High

0 Strain