Gene : Eucgr.I00598 E. grandis v2.0
Defline:  (1 of 2) K05752 - chromosome 3 open reading frame 10 Genomic Order:  475
Name:  ? Eucgr.I00598 Secondary Identifier:  ? PAC:32063532
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00598 0.5kb upstream 0.5kb upstream 1335 true Chr09: 12181386-12182720 Eucalyptus grandis
Eucgr.I00598 0.5kb upstream 0.5kb upstream 500 false Chr09: 12181386-12181885 Eucalyptus grandis
Eucgr.I00598 0.5kb downstream 0.5kb downstream 1335 true Chr09: 12181886-12183220 Eucalyptus grandis
Eucgr.I00598 0.5kb downstream 0.5kb downstream 500 false Chr09: 12182721-12183220 Eucalyptus grandis
Eucgr.I00598 1.0kb upstream 1.0kb upstream 1835 true Chr09: 12180886-12182720 Eucalyptus grandis
Eucgr.I00598 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12180886-12181885 Eucalyptus grandis
Eucgr.I00598 1.0kb downstream 1.0kb downstream 1835 true Chr09: 12181886-12183720 Eucalyptus grandis
Eucgr.I00598 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12182721-12183720 Eucalyptus grandis
Eucgr.I00598 2.0kb upstream 2.0kb upstream 2835 true Chr09: 12179886-12182720 Eucalyptus grandis
Eucgr.I00598 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12179886-12181885 Eucalyptus grandis
Eucgr.I00598 2.0kb downstream 2.0kb downstream 2835 true Chr09: 12181886-12184720 Eucalyptus grandis
Eucgr.I00598 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12182721-12184720 Eucalyptus grandis
Eucgr.I00598 5.0kb upstream 5.0kb upstream 5835 true Chr09: 12176886-12182720 Eucalyptus grandis
Eucgr.I00598 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12176886-12181885 Eucalyptus grandis
Eucgr.I00598 5.0kb downstream 5.0kb downstream 5835 true Chr09: 12181886-12187720 Eucalyptus grandis
Eucgr.I00598 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12182721-12187720 Eucalyptus grandis
Eucgr.I00598 10.0kb upstream 10.0kb upstream 10835 true Chr09: 12171886-12182720 Eucalyptus grandis
Eucgr.I00598 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12171886-12181885 Eucalyptus grandis
Eucgr.I00598 10.0kb downstream 10.0kb downstream 10835 true Chr09: 12181886-12192720 Eucalyptus grandis
Eucgr.I00598 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12182721-12192720 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051100 5270 Rosid View MSA
123747984 5271 Pentapetalae View MSA
122786023 5272 Eudicot View MSA
122047228 5273 Angiosperm View MSA
121347694 5274 Embryophyte View MSA
123380603 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4316 0.0 44.3441    
cufflinks 79.0809 0.0 183.327 High  
cufflinks 9.04452 0.0 26.2146   Low
cufflinks 133.438 0.0 301.041 High High
cufflinks 33.0598 0.0 83.7534    
cufflinks 27.5195 0.0 70.6828    

0 Strain