Gene : Eucgr.I00548 E. grandis v2.0
Defline:  (1 of 2) KOG2125 - Glycosylphosphatidylinositol anchor synthesis protein Genomic Order:  436
Name:  ? Eucgr.I00548 Secondary Identifier:  ? PAC:32065176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00548 0.5kb upstream 0.5kb upstream 10819 true Chr09: 11093429-11104247 Eucalyptus grandis
Eucgr.I00548 0.5kb upstream 0.5kb upstream 500 false Chr09: 11093429-11093928 Eucalyptus grandis
Eucgr.I00548 0.5kb downstream 0.5kb downstream 10819 true Chr09: 11093929-11104747 Eucalyptus grandis
Eucgr.I00548 0.5kb downstream 0.5kb downstream 500 false Chr09: 11104248-11104747 Eucalyptus grandis
Eucgr.I00548 1.0kb upstream 1.0kb upstream 11319 true Chr09: 11092929-11104247 Eucalyptus grandis
Eucgr.I00548 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11092929-11093928 Eucalyptus grandis
Eucgr.I00548 1.0kb downstream 1.0kb downstream 11319 true Chr09: 11093929-11105247 Eucalyptus grandis
Eucgr.I00548 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11104248-11105247 Eucalyptus grandis
Eucgr.I00548 2.0kb upstream 2.0kb upstream 12319 true Chr09: 11091929-11104247 Eucalyptus grandis
Eucgr.I00548 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11091929-11093928 Eucalyptus grandis
Eucgr.I00548 2.0kb downstream 2.0kb downstream 12319 true Chr09: 11093929-11106247 Eucalyptus grandis
Eucgr.I00548 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11104248-11106247 Eucalyptus grandis
Eucgr.I00548 5.0kb upstream 5.0kb upstream 15319 true Chr09: 11088929-11104247 Eucalyptus grandis
Eucgr.I00548 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11088929-11093928 Eucalyptus grandis
Eucgr.I00548 5.0kb downstream 5.0kb downstream 15319 true Chr09: 11093929-11109247 Eucalyptus grandis
Eucgr.I00548 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11104248-11109247 Eucalyptus grandis
Eucgr.I00548 10.0kb upstream 10.0kb upstream 20319 true Chr09: 11083929-11104247 Eucalyptus grandis
Eucgr.I00548 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11083929-11093928 Eucalyptus grandis
Eucgr.I00548 10.0kb downstream 10.0kb downstream 20319 true Chr09: 11093929-11114247 Eucalyptus grandis
Eucgr.I00548 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11104248-11114247 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050292 5270 Rosid View MSA
123741304 5271 Pentapetalae View MSA
122790215 5272 Eudicot View MSA
122044137 5273 Angiosperm View MSA
121345905 5274 Embryophyte View MSA
123425893 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.95687 0.0 13.8307    
cufflinks 8.27926 0.0 18.6571    
cufflinks 6.40716 0.0 14.7165    
cufflinks 5.3324 0.0 12.3527    
cufflinks 1.4712 0.0 3.88392   Low
cufflinks 5.31552 0.0 12.5291    

0 Strain