Gene : Eucgr.I00543 E. grandis v2.0
Defline:  (1 of 1) PTHR10551:SF9 - PROTEIN SINGED Genomic Order:  431
Name:  ? Eucgr.I00543 Secondary Identifier:  ? PAC:32064969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00543 0.5kb upstream 0.5kb upstream 5640 true Chr09: 11027163-11032802 Eucalyptus grandis
Eucgr.I00543 0.5kb upstream 0.5kb upstream 500 false Chr09: 11027163-11027662 Eucalyptus grandis
Eucgr.I00543 0.5kb downstream 0.5kb downstream 5640 true Chr09: 11027663-11033302 Eucalyptus grandis
Eucgr.I00543 0.5kb downstream 0.5kb downstream 500 false Chr09: 11032803-11033302 Eucalyptus grandis
Eucgr.I00543 1.0kb upstream 1.0kb upstream 6140 true Chr09: 11026663-11032802 Eucalyptus grandis
Eucgr.I00543 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11026663-11027662 Eucalyptus grandis
Eucgr.I00543 1.0kb downstream 1.0kb downstream 6140 true Chr09: 11027663-11033802 Eucalyptus grandis
Eucgr.I00543 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11032803-11033802 Eucalyptus grandis
Eucgr.I00543 2.0kb upstream 2.0kb upstream 7140 true Chr09: 11025663-11032802 Eucalyptus grandis
Eucgr.I00543 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11025663-11027662 Eucalyptus grandis
Eucgr.I00543 2.0kb downstream 2.0kb downstream 7140 true Chr09: 11027663-11034802 Eucalyptus grandis
Eucgr.I00543 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11032803-11034802 Eucalyptus grandis
Eucgr.I00543 5.0kb upstream 5.0kb upstream 10140 true Chr09: 11022663-11032802 Eucalyptus grandis
Eucgr.I00543 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11022663-11027662 Eucalyptus grandis
Eucgr.I00543 5.0kb downstream 5.0kb downstream 10140 true Chr09: 11027663-11037802 Eucalyptus grandis
Eucgr.I00543 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11032803-11037802 Eucalyptus grandis
Eucgr.I00543 10.0kb upstream 10.0kb upstream 15140 true Chr09: 11017663-11032802 Eucalyptus grandis
Eucgr.I00543 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11017663-11027662 Eucalyptus grandis
Eucgr.I00543 10.0kb downstream 10.0kb downstream 15140 true Chr09: 11027663-11042802 Eucalyptus grandis
Eucgr.I00543 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11032803-11042802 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069793 5270 Rosid View MSA
123744204 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.66602 0.0 19.7974    
cufflinks 16.4961 0.0 36.5624   High
cufflinks 3.88368 0.0 9.47558   Low
cufflinks 6.03636 0.0 14.0647    
cufflinks 4.13471 0.0 10.0104    
cufflinks 8.09143 0.0 18.6454    

0 Strain