Gene : Eucgr.I00539 E. grandis v2.0
Defline:  (1 of 7) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  427
Name:  ? Eucgr.I00539 Secondary Identifier:  ? PAC:32063656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00539 0.5kb upstream 0.5kb upstream 992 true Chr09: 10992022-10993013 Eucalyptus grandis
Eucgr.I00539 0.5kb upstream 0.5kb upstream 500 false Chr09: 10992022-10992521 Eucalyptus grandis
Eucgr.I00539 0.5kb downstream 0.5kb downstream 992 true Chr09: 10992522-10993513 Eucalyptus grandis
Eucgr.I00539 0.5kb downstream 0.5kb downstream 500 false Chr09: 10993014-10993513 Eucalyptus grandis
Eucgr.I00539 1.0kb upstream 1.0kb upstream 1492 true Chr09: 10991522-10993013 Eucalyptus grandis
Eucgr.I00539 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10991522-10992521 Eucalyptus grandis
Eucgr.I00539 1.0kb downstream 1.0kb downstream 1492 true Chr09: 10992522-10994013 Eucalyptus grandis
Eucgr.I00539 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10993014-10994013 Eucalyptus grandis
Eucgr.I00539 2.0kb upstream 2.0kb upstream 2492 true Chr09: 10990522-10993013 Eucalyptus grandis
Eucgr.I00539 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10990522-10992521 Eucalyptus grandis
Eucgr.I00539 2.0kb downstream 2.0kb downstream 2492 true Chr09: 10992522-10995013 Eucalyptus grandis
Eucgr.I00539 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10993014-10995013 Eucalyptus grandis
Eucgr.I00539 5.0kb upstream 5.0kb upstream 5492 true Chr09: 10987522-10993013 Eucalyptus grandis
Eucgr.I00539 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10987522-10992521 Eucalyptus grandis
Eucgr.I00539 5.0kb downstream 5.0kb downstream 5492 true Chr09: 10992522-10998013 Eucalyptus grandis
Eucgr.I00539 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10993014-10998013 Eucalyptus grandis
Eucgr.I00539 10.0kb upstream 10.0kb upstream 10492 true Chr09: 10982522-10993013 Eucalyptus grandis
Eucgr.I00539 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10982522-10992521 Eucalyptus grandis
Eucgr.I00539 10.0kb downstream 10.0kb downstream 10492 true Chr09: 10992522-11003013 Eucalyptus grandis
Eucgr.I00539 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10993014-11003013 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.37319 0.0 7.63234    

0 Strain