Gene : Eucgr.I00432 E. grandis v2.0
Defline:  (1 of 1) PTHR12059 - RIBOSOMAL PROTEIN L23-RELATED Genomic Order:  355
Name:  ? Eucgr.I00432 Secondary Identifier:  ? PAC:32062748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00432 0.5kb upstream 0.5kb upstream 1179 true Chr09: 8436789-8437967 Eucalyptus grandis
Eucgr.I00432 0.5kb upstream 0.5kb upstream 500 false Chr09: 8436789-8437288 Eucalyptus grandis
Eucgr.I00432 0.5kb downstream 0.5kb downstream 1179 true Chr09: 8437289-8438467 Eucalyptus grandis
Eucgr.I00432 0.5kb downstream 0.5kb downstream 500 false Chr09: 8437968-8438467 Eucalyptus grandis
Eucgr.I00432 1.0kb upstream 1.0kb upstream 1679 true Chr09: 8436289-8437967 Eucalyptus grandis
Eucgr.I00432 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8436289-8437288 Eucalyptus grandis
Eucgr.I00432 1.0kb downstream 1.0kb downstream 1679 true Chr09: 8437289-8438967 Eucalyptus grandis
Eucgr.I00432 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8437968-8438967 Eucalyptus grandis
Eucgr.I00432 2.0kb upstream 2.0kb upstream 2679 true Chr09: 8435289-8437967 Eucalyptus grandis
Eucgr.I00432 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8435289-8437288 Eucalyptus grandis
Eucgr.I00432 2.0kb downstream 2.0kb downstream 2679 true Chr09: 8437289-8439967 Eucalyptus grandis
Eucgr.I00432 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8437968-8439967 Eucalyptus grandis
Eucgr.I00432 5.0kb upstream 5.0kb upstream 5679 true Chr09: 8432289-8437967 Eucalyptus grandis
Eucgr.I00432 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8432289-8437288 Eucalyptus grandis
Eucgr.I00432 5.0kb downstream 5.0kb downstream 5679 true Chr09: 8437289-8442967 Eucalyptus grandis
Eucgr.I00432 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8437968-8442967 Eucalyptus grandis
Eucgr.I00432 10.0kb upstream 10.0kb upstream 10679 true Chr09: 8427289-8437967 Eucalyptus grandis
Eucgr.I00432 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8427289-8437288 Eucalyptus grandis
Eucgr.I00432 10.0kb downstream 10.0kb downstream 10679 true Chr09: 8437289-8447967 Eucalyptus grandis
Eucgr.I00432 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8437968-8447967 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068912 5270 Rosid View MSA
123740865 5271 Pentapetalae View MSA
122789044 5272 Eudicot View MSA
122044444 5273 Angiosperm View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1854 0.0 38.8587    
cufflinks 23.197 0.0 54.4677   High
cufflinks 18.1188 0.0 43.4934    
cufflinks 10.5528 0.0 26.8095   Low
cufflinks 12.9635 0.0 32.057    
cufflinks 15.891 0.0 38.0523    

0 Strain